Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0688 |
Symbol | |
ID | 5053157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 687081 |
End bp | 687479 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640470843 |
Product | PilT domain-containing protein |
Protein accession | YP_001155470 |
Protein GI | 145588873 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.442109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAGT ACTTATTGGA CACAAATATT GTTATTTATG TCATAAAGCG AAAACCGCTA GAGGTGCTTA AAGTTTTCAA CAAAAATGCT AATCGTATGG CTATATCAGC AATTACATTG GCAGAGCTAA TTTATGGCGC CGAAAAAAGT AAGCAAGTAG AAAAAAATCT TAATGTTATT GAAGACTTCA TCAGCCATTT AGAGGTTTTA CCGTATGACA TTACCGCAAC TCAGCATTAC GGGCAAATTA AGGCTTTTTT AGAGCACTCA GGCAAGCCTA TTGGAGTGAA TGATATTCAT ATTGCAGCTC ACGCCAGAAG TCATGGCTTA ACTTTGGTGA CTAACAATAT GTCTGAGTTT AAGAGGGTCC CAAACCTTGC CCTTGAAAAC TGGGTTTAA
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Protein sequence | MLKYLLDTNI VIYVIKRKPL EVLKVFNKNA NRMAISAITL AELIYGAEKS KQVEKNLNVI EDFISHLEVL PYDITATQHY GQIKAFLEHS GKPIGVNDIH IAAHARSHGL TLVTNNMSEF KRVPNLALEN WV
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