Gene Pnuc_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0688 
Symbol 
ID5053157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp687081 
End bp687479 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content38% 
IMG OID640470843 
ProductPilT domain-containing protein 
Protein accessionYP_001155470 
Protein GI145588873 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.442109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGT ACTTATTGGA CACAAATATT GTTATTTATG TCATAAAGCG AAAACCGCTA 
GAGGTGCTTA AAGTTTTCAA CAAAAATGCT AATCGTATGG CTATATCAGC AATTACATTG
GCAGAGCTAA TTTATGGCGC CGAAAAAAGT AAGCAAGTAG AAAAAAATCT TAATGTTATT
GAAGACTTCA TCAGCCATTT AGAGGTTTTA CCGTATGACA TTACCGCAAC TCAGCATTAC
GGGCAAATTA AGGCTTTTTT AGAGCACTCA GGCAAGCCTA TTGGAGTGAA TGATATTCAT
ATTGCAGCTC ACGCCAGAAG TCATGGCTTA ACTTTGGTGA CTAACAATAT GTCTGAGTTT
AAGAGGGTCC CAAACCTTGC CCTTGAAAAC TGGGTTTAA
 
Protein sequence
MLKYLLDTNI VIYVIKRKPL EVLKVFNKNA NRMAISAITL AELIYGAEKS KQVEKNLNVI 
EDFISHLEVL PYDITATQHY GQIKAFLEHS GKPIGVNDIH IAAHARSHGL TLVTNNMSEF
KRVPNLALEN WV