Gene Pnuc_0677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0677 
Symbol 
ID5053787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp675686 
End bp676939 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content47% 
IMG OID640470832 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_001155459 
Protein GI145588862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0743281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAA ACTTGTTCCC TAAATTGCCA TCTAAAGCCC TTTTACTAGG GGCTTTAGGG 
TGCGTTGTCT CTGCGCTTTC ATGGGCGCAG ATGGACCATT CCTCGCATGC TGGCATGATG 
ATGCCCGCCA AACCAACGGC ATGCACTAGC ACCAGTCTGG ATTGTGCTAA TGGTGCTACA 
CCTTTTTTAA CTACTGATGG CAGGTTGTTG TTAGCTTGGA CTGCAGGAGG CTCTGTATCA 
GTGGCGCAGT CAGATGATAT GGGCAAGAGC TTTGGCCCAG CAGTCATCAT TGGTGAGCAT 
GGTAAATCTT TGGATACAGG CGCGGATTCG CGACCACAAA TTGTGGCCGA CGATCGTGGA 
AACGTTTTTC TCGCTTATGC CTTTTTCAAA GACTCTAACT GGAATGCGCA AATCAATGTC 
GCTCAATCAT CGGATTGGGG CCATACATTT TCAACTCCTA GATCATTGGT TAATGATGGG 
TCTAGTCAGC GATTTCCGTC GGTTATTAAG CGTCCTGACG GCTCTATTTT TATTGCCTGG 
ATCGATAAAC GCTTGGTTGC TCAGGCTAAG AAAAGTGGCC ACTCTGTTCT AGGTGGATCT 
ATTGCTTATG CATTTTCAAA TGATGGTGGT GACACCTTTT CGCCAGAGAG GATTGCCAAT 
GAGAGCAGCT GCGAATGTTG CCGTATCGGC GCCGCTAATG ATCCGCAGGG TGGTGTGGCA 
ATTATTTATA GGGCAATCTT CCCAGGCGGT GTACGGGATC ATGCCTCTCA AATTATTTCT 
CAGACAGCCA TGGGCAAGGT ACAACGGGTA TCCCACGATG AGTGGAAGAC TGATGCCTGC 
CCACACCATG GACCTACGAT TGCAGTTTCA GGGTCTGGAA AAATGCACGT AGCTTGGTTT 
ACCCAAGGCA AAGCCCGCTC TGGCGTGTTT TATGCTAACT CCAATAATCA AGGCGCTACA 
TACTCTAAGC CGATCCGGAT TGGCAAGGAG GGTAGCAATG TTTCCCGCCC TTACTTGTTA 
GCCTTGGGAT CATCAATCTG GCTGGTCTGG AAAGAGTTTG ACGGCATCAA CACCACCATC 
TATTTACAGC AATCTTCTAA TGATGGAAAA ACTTGGTCTA CACCAAAGCA GTTAAGCCAG 
ACAAATGGCT ATTCAGATCA TCCTTTATTA ATTAATAAAG GTGATTTGGT ATTTTTATCT 
TGGCTGACTC GGGCAGACGG ATATCAACTC ATTCCCTTAA ACTCCAACCC ATGA
 
Protein sequence
MSKNLFPKLP SKALLLGALG CVVSALSWAQ MDHSSHAGMM MPAKPTACTS TSLDCANGAT 
PFLTTDGRLL LAWTAGGSVS VAQSDDMGKS FGPAVIIGEH GKSLDTGADS RPQIVADDRG 
NVFLAYAFFK DSNWNAQINV AQSSDWGHTF STPRSLVNDG SSQRFPSVIK RPDGSIFIAW 
IDKRLVAQAK KSGHSVLGGS IAYAFSNDGG DTFSPERIAN ESSCECCRIG AANDPQGGVA 
IIYRAIFPGG VRDHASQIIS QTAMGKVQRV SHDEWKTDAC PHHGPTIAVS GSGKMHVAWF 
TQGKARSGVF YANSNNQGAT YSKPIRIGKE GSNVSRPYLL ALGSSIWLVW KEFDGINTTI 
YLQQSSNDGK TWSTPKQLSQ TNGYSDHPLL INKGDLVFLS WLTRADGYQL IPLNSNP