| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0665 |
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| Symbol | |
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| ID | 5053929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 656046 |
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| End bp | 657425 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470819 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001155447 |
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| Protein GI | 145588850 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGACTG AACAATCTGG CTTAAAACGT CATCTCAAAG TAAGGCACAT TCGATTAATG
GCCTTAGGTT CAACAATCGG CGTGGGCCTA TTTCTGGGTT CGGCATCAGC AATTCAAATT
GCAGGTCCAT CGATTCTTCT GGGTTATCTA CTTGCTGGCA TCGTCGCATT TATCGTGCTG
CGCACTCTCG GTGAAATGGC TGTGCATGAG CCTGTAGCAG GTTCATTTGC TGCCTACGCT
AATACTTATG TTGGCCCCTT GGCTGGATAT ATGGTGGGTT GGGGTTATTG GACATATTGG
ATCGTAGTGG GAATTGCTGA GGTCACTGCC GTTGGCATTT ACATGGGCAT TTGGTTTCCT
GAAACACCGC AATGGATTTG GGCGCTTTCT TCCATCGCGA TGATGGGTTT AATCAACTTG
ATTGCTGTAA AAGTATTTGG CGAGTTTGAG TTTTGGTTTG CCTTGATTAA GGTAGTAGCA
ATTGTCGCCA TGATCGCCCT CGGAGGGTCA GTCATTCTTT TTGGTTTTAC TAATGATTGG
CAACCTATAG GCTTGAGTAA TCTTTGGCAG TATGGCGGTT TCTTTCCAAA TGGGATTACT
GGAATGTTGC TCTCGTTACA AATGGTCTTG TTTGCATACG TCGGTATTGA AATGATCGGG
CTATCTGCTG GAGAGGCGGA GAATCCAGAA AAAACCATTC CGATGGCAAT CGATTCTCTC
GCATGGCGCA TTTTGATTTT CTACATGGGC GCAATTTTGG TTATCTTGGC TATCTTCCCC
TGGAATGAAG TGGGTCAGCA AGGAAGTCCT TTTGTAGTGA TGTTTGAGCG CATTGGTTTG
CGTGAAGCTG CAGGCTTGAT TAACTTTGTG GTGATTACTG CGGCTCTCTC ATCCTGTAAT
GCAGGCATCT TTAGCGGCGG ACGAATTCTC TATTCCTTAT CGTCTAATGG TTATGCGCCG
GCACCTTTTG GCAAATTATC TAAGTATGGC GTCCCACATC GCGCTGTGAT GTTGACCGTG
GCTGTTTGTA TGTCTGGTGT TGTCCTTAAT TACTTTGTGC CAGATAAGGC ATTTCAGTAC
ACCATGGCAG CAGTGACTTT TGTGGGCCTG ATGGTCTGGA TTGCCATCCT CTTTACGCAG
ATGAAATTTC GACGCTCATT AACCAAGGAT CAAGTAGCTC AGTTGAGTTA TCGCACTCCT
TGGTGGCCTT ATTCCTCGTG GTTTGCTTTG GCATTTATTG TTTTTGTAGT GGTGCTGATG
GGCTTTCATG AGGATGCACG GGTAGCTTTA ATTCTGGGCC CGTGTCTTTT AGGGGTGTAT
CTAGCGATGT TTTATATCGT TGGGTTACAT CGCAAAAAAA ACCGTCGTGA GTTTAAATAA
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| Protein sequence | MQTEQSGLKR HLKVRHIRLM ALGSTIGVGL FLGSASAIQI AGPSILLGYL LAGIVAFIVL
RTLGEMAVHE PVAGSFAAYA NTYVGPLAGY MVGWGYWTYW IVVGIAEVTA VGIYMGIWFP
ETPQWIWALS SIAMMGLINL IAVKVFGEFE FWFALIKVVA IVAMIALGGS VILFGFTNDW
QPIGLSNLWQ YGGFFPNGIT GMLLSLQMVL FAYVGIEMIG LSAGEAENPE KTIPMAIDSL
AWRILIFYMG AILVILAIFP WNEVGQQGSP FVVMFERIGL REAAGLINFV VITAALSSCN
AGIFSGGRIL YSLSSNGYAP APFGKLSKYG VPHRAVMLTV AVCMSGVVLN YFVPDKAFQY
TMAAVTFVGL MVWIAILFTQ MKFRRSLTKD QVAQLSYRTP WWPYSSWFAL AFIVFVVVLM
GFHEDARVAL ILGPCLLGVY LAMFYIVGLH RKKNRREFK
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