Gene Pnuc_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0660 
Symbol 
ID5053495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp651642 
End bp652322 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content46% 
IMG OID640470814 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001155442 
Protein GI145588845 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGGT TCACATTAAA CCTCTTATCA CCTACAAACG CTGGAATCAT TGATTTCCCA 
ACCTATTTGT TGGGCACACT CATCACGATT CTTTTTCCAG GGCCAAACTC GCTTTATGTT 
CTCACTATCA CCACCTTAAA AGGGTGGCGC TATGGCGCGT GGGGTGCATT GGGAATATTC 
ATTGGAGATT CGGTGTTGAT GGGTGCAGTA GTGTTGGGCG CAGTATCTCT GCTGATTTCA 
TCGCCAATCG CTTTTAATGT GGTGCGCCTT ATGGGAGCAG CCTATTTAGG GTGGATAGGA 
ATTGGCTTGG TGAGAAGCGG GTGGCAGCGC TGGAACTCTA AAGCTGATTC TGCAAACATC 
AATGTATTGC AGGTGCGCAT CATGCTTCTG CATCCACTAG CTGCTGCACT CGTTTTATCG 
CTGACTAATC CCAAGGCAAT TTTCTTTTTT ATTGCATTTT TCTCGCAATT TATCAGACCA 
GATTTTGAGT ACCCCTTACA TACTTTTTTC TATCTAGCGA TCGTTTTGCA GCTAATGAGT 
ATGGCTTATC TCGGCACTCT TATATGTGTT GGCCAATATT GCCTCACCTA CTTTCAGAGA 
CACCAGCGTT TGGCTGCGGG TCTGTGGATA GTCGCTGGAT TACTCTTTAT TGGGTTTGCC 
CTGCGACTAG CGCTCGCTTA G
 
Protein sequence
MEWFTLNLLS PTNAGIIDFP TYLLGTLITI LFPGPNSLYV LTITTLKGWR YGAWGALGIF 
IGDSVLMGAV VLGAVSLLIS SPIAFNVVRL MGAAYLGWIG IGLVRSGWQR WNSKADSANI 
NVLQVRIMLL HPLAAALVLS LTNPKAIFFF IAFFSQFIRP DFEYPLHTFF YLAIVLQLMS 
MAYLGTLICV GQYCLTYFQR HQRLAAGLWI VAGLLFIGFA LRLALA