| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0643 |
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| Symbol | |
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| ID | 5053120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 633860 |
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| End bp | 635002 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470797 |
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| Product | choloylglycine hydrolase |
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| Protein accession | YP_001155425 |
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| Protein GI | 145588828 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3049] Penicillin V acylase and related amidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.824295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAAATTTTAA GACTATCACT AGCTTAATGC TTGCAGGAGC ACTTGTTTTC
TCCTCAATCG GTAATGCTAT CGCGTGTACA GCTCTCATCG TCACAGACGT TAACGGTAAT
GCCTATCATG GCCGTACCCT GGAATTTAGT TTTCCCGTCC CAACCTTGAT GACTTATTTT
CCAGCTGGGA CCAAAATCGA ATCTGTAACT CCGGCTGGGG TTCAGGGCGT CACATTTAAT
ACGAAGTACG CCATTTTAGG AATGACTGCA GCAGTAACAA CTGGAGCCAA ACAACCCCTC
ATTGATGAAG GGGCTAATGA TCAAGGTTTG AGTTTTTCTG GTAACGAGTT AAATGATTTA
ACAGCACCAC CTTTAGGTGA TGACGCATCA AAAATATTGT CCTTGAATGA TTTTGGCGCT
TGGGTATTGG GTAATTTTAA GACAGTAGCC GAAGTCAAGA CTGCCTTACT CACAGACAAC
ACTGAGTTTT GGTTGCCGCC GATACCGATG ATGGGCGGCG CACCTTTGCC ACTGCATTAC
GCTATTTTTG ACAAGGCAGG CAATGGTTTA GTTGTTGAGT TTATTAATGG CAAGAAGAAT
GTCTACGACA ATCCTGTTGG CGTCATGACA AATGCTCCTG AGTTCCCTTG GCATTTAACT
AATCTGAATA ACTATACATT TACAAACGTG AATAAAAACA CCGGCCAACT AGGAAAGCAA
AAGCTACAAA CTGCAGATGC GGGTATTGCT CTGACTGCCT TACCATCCGC ACAAACTGCT
ACAGGACGAT TTGTAAAAGC TGCTTTTTAC ACTAACTATG TTCGCAAGGG CAAAAATCCT
GAGGACGCCA TTAATTTATT GGCACACATC ATGAATAACT TCGACCGACC CCAAGATCTG
ACGATTGATC CCCCTGGCGG AGTTGGGGAT GGGCCACGAG GAAGCAAATT TTCTAGTGAG
GTCACTGAGT GGACCACGAT GAATGATTTG GCGAGAAATC TTACTTTTGT AAAAAGTATT
AATGCGCTGA ACTGGACAGT AATCGATATG AATAAATTAA AGGATGTGCA ACAGGTGAAA
TCGGTATCAA CCTATGCCGT AGACCAGGCT GGGGCTGATG CATTTAATTT GTTTTATAAA
TAA
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| Protein sequence | MKKKNFKTIT SLMLAGALVF SSIGNAIACT ALIVTDVNGN AYHGRTLEFS FPVPTLMTYF
PAGTKIESVT PAGVQGVTFN TKYAILGMTA AVTTGAKQPL IDEGANDQGL SFSGNELNDL
TAPPLGDDAS KILSLNDFGA WVLGNFKTVA EVKTALLTDN TEFWLPPIPM MGGAPLPLHY
AIFDKAGNGL VVEFINGKKN VYDNPVGVMT NAPEFPWHLT NLNNYTFTNV NKNTGQLGKQ
KLQTADAGIA LTALPSAQTA TGRFVKAAFY TNYVRKGKNP EDAINLLAHI MNNFDRPQDL
TIDPPGGVGD GPRGSKFSSE VTEWTTMNDL ARNLTFVKSI NALNWTVIDM NKLKDVQQVK
SVSTYAVDQA GADAFNLFYK
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