| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0629 |
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| Symbol | |
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| ID | 5053636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 618793 |
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| End bp | 619281 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470783 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001155411 |
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| Protein GI | 145588814 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0377495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCAG CAGTAAATAA ATGCTTGGTA TTGCTGGGGT CAGTCGCATT AATGGCCGCC
GCTTTGATTC TCAGTTATAG CGTGATGTCA CGCGGGCTAT TCCATGCGGC AAATGACTGG
CAGGATGAAG CTGCTTTGTT CTGCCTGGTT GGGGTCACCT TCCTTTGTAG CTCATATGTT
CAGGAAAAGC GCGGACATAT TGGTATTTCT GCAATTGAAG GCCTATTGCC TCATCCAGTT
AATAAAGTCC GCGGAATTGT CGTTGATGTG ATCTCCTGTT TATTTTTTGC TTTTTTCTCA
GCCAAAACTT GGGATTTACT CCATGAAGCA TGGGTTGATG GACAGGTAAC GAATTCCACT
TGGGCACCCT CATTATGGAT TCCCTATTCA ATGATGTTCA CTGGAATGGT GCTTCTTACA
TTCCAACTAT TTTTACAAAT TTTTATCAGA AAAGCAGTAG CTCCTGATGC TGTAAAAGGG
GGTCATTAA
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| Protein sequence | MMSAVNKCLV LLGSVALMAA ALILSYSVMS RGLFHAANDW QDEAALFCLV GVTFLCSSYV
QEKRGHIGIS AIEGLLPHPV NKVRGIVVDV ISCLFFAFFS AKTWDLLHEA WVDGQVTNST
WAPSLWIPYS MMFTGMVLLT FQLFLQIFIR KAVAPDAVKG GH
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