Gene Pnuc_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0627 
Symbol 
ID5052817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp616283 
End bp617587 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content46% 
IMG OID640470781 
Productmalonyl-CoA decarboxylase 
Protein accessionYP_001155409 
Protein GI145588812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000138048 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAA AGTTAGCTAA AGCCCGGTAT TTCTCGCGCG TTACAGGCGC CGTGAATCGT 
CTCATCTCAG AACGAGGTGA ATCCAATGCC GTAAGTATGG CTGATGATGT CATTCATAAT 
TACCGCAAAC TTTCTAAGGA CCAGCACGCA AAATTTTTCA CTTTTCTATT CGAAAAATTA 
AACCCGGATC CTGCAGCGGT AATGACCGCG GCTCAAAATT TTTCTACGGA AGCAACTGCA 
CGCAATTACA TTAAGTTGCA GCGCGTGACA GAGCCGCCAA GACAAGAATT ATTTCGCCGC 
TTAAATCGCG CGACCAATGG TACTGCAGCG CTAGTAGCAA TGCGTCGTGA TTTATTGCAA 
TTGCTTGAGA AACAACCAGA ACTCACAGCA GTTGATTTCG ATTTACGCCA CCTTTTATCT 
TCTTGGTTCA ACCCTGGATT TTTGAAGATG CATCAGGTGG ATTGGCAATC GCCTGCAGAA 
ATTTTAGAAA AATTGATTCA GCACGAAGCC GTTCATGCGA TTGATGGTTG GGATGATTTA 
CGTCGCCGCC TTCAGCCAGA TCGTCGCTGC TTTGCCTTTT TCCATCCACA GCTGCCTAAT 
GAGCCATTGA TATTCGTTGA AGTGGCGCTG TTACCAGAGA TTCCAGCGGT AATTACTCCA 
TTGGTAGATA AGAAGGCAGA AACAGTACAT CAAAGTTCAC AGTACAAAGT TGCTGCTTTT 
TATTCGATTA GTAACTGTGA GCCTGGTTTA CGTGGCGTCT CGATGGGTAA CTTCTTGATT 
AAGCGCGTGG CTGAAAAATT GCATGCGGAG TTCCCTGGAA TCAAAACATT TGTAACGCTA 
TCTCCAATTC CTGGATTTAT TGATTGGGTA GCTGCTGGCG CAGATGTGGC AGGCGATAAA 
GCGGGTGCAC AACTTAAGCC GGCTATTCGA ACAGCGCGTG AGCATGCCCT GGAAACATTG 
GGTCTCACAA CACGTTCTTG GACAGAGCGT TTAAGTTCTG GCTGGCATCC TGATAATGCA 
AGCGAAAAAG AAAAAGCGGC CTTGCTCTGT TTGGCAGGTA TTTATTTAGC CTTGGGTTCG 
GCAGGGCGTA ATGGCAATCC AGTAGCCAAG TTCCATTTGG GGAATGGTGC CAAATTACAC 
CAAATTAATT GGGCAGGGGA TTTGTCACGC AAAGGATTAC GACAGTCTGC CTCTCTGATG 
GTGAATTATC TGTATGACTT ATCCGCTGTT GAAGAGAACC ATGAGCGCTT TACGCATGGT 
GAAATTGACT ATTCAAGGGC GGTAGGGCGC TTAATGCAGC CCTAA
 
Protein sequence
MLEKLAKARY FSRVTGAVNR LISERGESNA VSMADDVIHN YRKLSKDQHA KFFTFLFEKL 
NPDPAAVMTA AQNFSTEATA RNYIKLQRVT EPPRQELFRR LNRATNGTAA LVAMRRDLLQ 
LLEKQPELTA VDFDLRHLLS SWFNPGFLKM HQVDWQSPAE ILEKLIQHEA VHAIDGWDDL 
RRRLQPDRRC FAFFHPQLPN EPLIFVEVAL LPEIPAVITP LVDKKAETVH QSSQYKVAAF 
YSISNCEPGL RGVSMGNFLI KRVAEKLHAE FPGIKTFVTL SPIPGFIDWV AAGADVAGDK 
AGAQLKPAIR TAREHALETL GLTTRSWTER LSSGWHPDNA SEKEKAALLC LAGIYLALGS 
AGRNGNPVAK FHLGNGAKLH QINWAGDLSR KGLRQSASLM VNYLYDLSAV EENHERFTHG 
EIDYSRAVGR LMQP