| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0618 |
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| Symbol | |
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| ID | 5052743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 606999 |
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| End bp | 607718 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470771 |
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| Product | hypothetical protein |
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| Protein accession | YP_001155400 |
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| Protein GI | 145588803 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.979417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGCC ATTCGAAATG GGCCAATATT CAGCACCGCA AAGGTCGTCA AGACGAAAAA
CGCGGCAAGA TTTGGACCAA ACTCATTAAA GAAATCACTG TCGCAGCCAA AATGGGTGGC
GGCGATCTCA CCGCTAATCC CCGCTTACGT TTGGCAATAG ACAAGGCTAA AGATGCCAAT
ATGCCTAATG ACAACGTGCA AAGAGCTATT CAGCGCGGCA CGGGTTCACT TGAAGGAGTG
AACTACGAAG AGATTCGTTA TGAAGGTTAT GGCATGAATG GTGCTGCCAT CATTGTCGAC
TGCTTAACAG ATAACCGTAC ACGCACCGTT GCTGAAGTTC GCCATGCCTT TAATAAGAAT
GGCGGCAATA TGGGAACAGA GGGATCGGTT GCTTTCCTCT TCAAACATTG TGGACAAATG
TTATTTGCGC CTGGTACTAG TGAAGATCAA CTCATGGAAG TTGCTTTAGA TGCTGGCGCC
GAGGATGTAA TCACACATGA CGATGGATCT CTTGAGGTGC TAACACCGGT ACCTGATTTT
TCTAAGGTAC AAGATGCGAT TAGTCAGGCT GGCCTCAAAG CAGAACTAGC TACTGTCGCT
ATGCGTCCAG AAACTGAAAT TGCCCTAGAG GGTGATCAAG CTGAAAGCAT GCAGAAATTA
TTAGATGCGC TTGAGAACCT AGATGATGTA CAAGAAGTAT TTACAAACGC AGCCCTATAA
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| Protein sequence | MAGHSKWANI QHRKGRQDEK RGKIWTKLIK EITVAAKMGG GDLTANPRLR LAIDKAKDAN
MPNDNVQRAI QRGTGSLEGV NYEEIRYEGY GMNGAAIIVD CLTDNRTRTV AEVRHAFNKN
GGNMGTEGSV AFLFKHCGQM LFAPGTSEDQ LMEVALDAGA EDVITHDDGS LEVLTPVPDF
SKVQDAISQA GLKAELATVA MRPETEIALE GDQAESMQKL LDALENLDDV QEVFTNAAL
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