| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0606 |
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| Symbol | |
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| ID | 5053873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 592924 |
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| End bp | 596538 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470759 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001155388 |
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| Protein GI | 145588791 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAC CCCGTTTTGT ACATCTACGC ATTCATTCCG AGTTTTCAAT TACGGATGGA
GTCGTTCGTA TTGACGATGC GGTAGCTACA GCTGTAAAAG ATGAAATGGG CGCCTTGGCC
CTAACGGACT TAAGCAATTT ATTTGGCTTG GTGCGCTTTT ATACGGCTGC CCGATCAGGA
GGTATTAAAC CCATCGCTGG CGCCGATGTT TGGGTCAGTA ACCCACAGGA TCCTGATCAA
CCCCATCGTC TATTGTTATT GGTTCAAAAC CATTCGGGTT ATTTAAATCT TTGCCAACTT
TTAAGCAAGG CTTCACTTGA TAACCAATCT CGCGGTCGGG CTGAGGTCGA CTTAGCCTGG
TTTAGTGAAC CAGCAGCTAA AGCCGAAGAT AAAGCAGCCA AGAGAACAAT GGCCTATGGT
TTGATTGCAC TGTCAGCTGC ACGTAACGGT GAAGTGGGTG CAGCTTTATT GGCCGATCAA
GAAGACATGG CTAAAGCTGC TGCACTGAGA TTGGAGAAGT TATTTCCTAA ATCGTTTTAC
ATTGAAATTC AGCGTGGCGG GCACCCTCAG GATGAAAAGC ATCTTCAGTT AGCATGCCAC
CTCGCTAGTG AATTAAAGTT GCCTGTAGTA GCAACACATC CTGTGCAATT TATGCAAAGA
AGCGACTTCA TTGCCCATGA GGCACGGGTC TGTATTGCTG AAGGTGAGTT GCTTGGAAAT
CCTCGCCGTC AAAAGAAATT TAATGATGAG CAATATTTCT TGACGCAGGA GGAGATGGAA
AAGCGTTTCG CTGATTTACC AGCCGCTATA GCTAACTCGG TAGAAATTGC TAAGCGTTGT
AATCTTTCTT TAGTGTTGGG GCAGCCACGT TTACCGGACT TCCCGACACC TCCAGGCATT
ACGCTCGATG ATTACTTGCT ACAGCAATCT GAAGTTGGTC TAGAGCGTCA CATGGAGAAA
AACTTTCCAG ACCCAGAAGA GCGTGCCAAA GAAATGTCCC GCTACCATGA CCGCTTAGTC
TTTGAGGTCA AGACGATTTC TCAGATGGGT TTCCCGGGTT ATTTTCTGAT CGTGGCGGAC
TTCATTAACT GGGCTAAAAA TAATGGTGTT CCAGTTGGCC CAGGTCGTGG ATCAGGTGCT
GGTTCTTTAG TGGCGTATTC CTTGGGTATT ACCGACTTAG ATCCCCTGCG TTACAACTTA
CTGTTTGAGC GCTTCTTAAA TCCTGAGCGG GTATCCATGC CCGACTTCGA TATCGATTTT
TGTCAGCACG GGCGCGATCG GGTCATTCAA TACGTTAAAG ACAAATACGG TAAAGACGCG
GTTAGCCAGA TTGCTACCTT CGGAACCATG GCGGCGAGAG CTGCAATTCG TGACGTTGGT
CGCGTATTGG AGCAGGGTTA TAACTTTGTT GACGGTATCG CTAAGTTGGT ACCGAATAAG
CCAGGTCAAT ATATGACTAT TGAAATGGCT AAAAAAGAAG AGAAGCAATT AGCCGAGCGC
GAAAAGAATG AAGATGAAGT GCGTCAATTA CTTTCTTTGG CGCAGCAGTT AGAGGGTATG
ACTCGTAACG TGGGCATGCA TGCTGGTGGA GTATTGATTG CTCCCGGTCG TTTAACAGAT
TTTTGCCCAC TCTATACGCA AGAAAGTAAA GATCAAGATA GTAGCTCTGT AATCAGTCAG
TTTGATAAGG ATGATGTCGA AGCCATCGGA TTAGTGAAGT TCGACTTCTT GGGTTTAACA
ACCCTCACCA TCTTGGCCGC AGCAGAGCGC TGGATTAAAG CCCTCCATGC TGATCGCAAG
GATTGGGATA TCGGCGAGAT TCCACTGGAT GATGAAAAGG CGTTTGACGT ACTTAAAAAG
GCAAATACCG TTGCTGTATT CCAGCTGGAA AGCCGCGGCA TGCAAGGCAT GCTTCGCGAA
GCAAAGCCAG ACCGCTTTGA AGACATTATT GCGTTGGTTG CTTTGTATCG CCCAGGCCCA
ATGGATCTCA TCCCAGACTT TATTGAGCGT AAGCATGGAC GTCAAAAAGT AGAGTATCCG
GATCCTCGTA TTGAGCCAGT GTTGCGTGAG ACCTACGGCA TCATGGTCTA TCAAGAGCAG
GTGATGCAAA TGGCACAGAT GATTGGCGGC TACTCATTGG GTGGCGCTGA CATGTTGCGT
CGTGCGATGG GTAAGAAAAA GCCAGAAGAA ATGGCGCAGC ATCGCAAGAT TTTTAGTGAT
GGTGCAAAAG CGGGCGGTAT CTCTGAAGCT AAAGCGAACG AGATTTATGA CTTGATGGAG
CGTTTTGCTG GGTATGGATT TAATAAATCC CATGCTGCTG CATATGCCTT GTTAGCCTAT
CAAACCGCTT GGCTAAAAGC GTATTACCCA GCTGAATTTA TGGCTGCCAA CTTATCGCTA
GCAATGGATG ACACCGATAA GGTGAAAATT CTGTATGACG ATTGTTTGGT GAATCAAATC
CGCGTGTTCT CGCCTGATAT CAATACCGGT GTTTATGAGT TCACTCCACT TCGCGCTCCT
GATGCGACAC CTGATAGCCC AATTAGTCAT ATTCGTTACG GACTGGGTGC TGTTCGCGGA
ACCGGTGAGG CTGCAATTGA ATCGATAGTT AAAGCCCGAG AAGCGGATGG ACCGTTTAAA
GACTTGTTTG ATTTTTGCGC ACGGGTAGAT CGCCGACAAG TGAATCGACG CGCGATTGAA
GCGCTCATGC GTGCAGGCGC ATTCGATAGC CTTTACCGAG ATTCCGTTCC AGCTGGTGGC
AATCTTTATG ATATTCGTTC TACCTTGTTG GCATCTTTGG CTAGAGCCAT TGAAGCTGCT
GAACAAGCAG AGGCCTCCAT TCATCAAGTG AGTTTATTTG AAGTGGCTGG TGAAGAGCAT
CGACACCTAC CTGAGTTAGT GCGTGAGCCT ATATGGTCAG AGAAGAAACG ACTCCAGGAA
GAAAAGGCTT CATTAGGCCT ATGCTTAACC GGGCATATGT TTGATGCTTA TCGAGATGAG
ACGGCGCATT TCATTCGCCA ACCTTTATCC AAATTGGTCG AAGGTAAAGA CCAGTTAGTC
GCAGGCATCA TTACTTCTGC ACGCATGCTT ACAGGTCAAC GTGGACGAAT GATGATTGCT
ACGATTGATG ATGGTACTGC CGCCGTAGAG GTCACTCTGT ATAGCGAAGT CTATGAACCC
AACCGCTCTT GGCTCAAGGA AGATGAGCTA TTAATTGCCA AGGTAAACGT CTCCCCCGAT
AAGTTTTCGG GTGGCATGAG AATTGTTTCC GAAGCAGTGA TGGATATCAC GGGTGCTCGA
ATGCGTTTTG CGCGCAATAT CCATGTCTGC CTTGATCCCG CAATTGATAT CAGAATGTTG
CGTAGTCAAA TTGGACCTTA TTTAATGGCT AATCGTGCGC GCGATCCAAG GCAGGGTGCG
CCTTTTGCAA CGCCGGGTTC AAATGAGGGT GTTAAAGGCT TAATGCTGAC TGCTGCTGTG
ACTACTAGTG GCGGGGCTTG CTTAATGCAG TTTCCCGAAG AGATGCGCAT ATATCCCGAC
GATGCGTGCT TGCATAGCCT ACATCAATTA TTAGCTTCCA AACAGAGTAA TGCGGTAGAG
GTTCAATACC ACTAA
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| Protein sequence | MASPRFVHLR IHSEFSITDG VVRIDDAVAT AVKDEMGALA LTDLSNLFGL VRFYTAARSG
GIKPIAGADV WVSNPQDPDQ PHRLLLLVQN HSGYLNLCQL LSKASLDNQS RGRAEVDLAW
FSEPAAKAED KAAKRTMAYG LIALSAARNG EVGAALLADQ EDMAKAAALR LEKLFPKSFY
IEIQRGGHPQ DEKHLQLACH LASELKLPVV ATHPVQFMQR SDFIAHEARV CIAEGELLGN
PRRQKKFNDE QYFLTQEEME KRFADLPAAI ANSVEIAKRC NLSLVLGQPR LPDFPTPPGI
TLDDYLLQQS EVGLERHMEK NFPDPEERAK EMSRYHDRLV FEVKTISQMG FPGYFLIVAD
FINWAKNNGV PVGPGRGSGA GSLVAYSLGI TDLDPLRYNL LFERFLNPER VSMPDFDIDF
CQHGRDRVIQ YVKDKYGKDA VSQIATFGTM AARAAIRDVG RVLEQGYNFV DGIAKLVPNK
PGQYMTIEMA KKEEKQLAER EKNEDEVRQL LSLAQQLEGM TRNVGMHAGG VLIAPGRLTD
FCPLYTQESK DQDSSSVISQ FDKDDVEAIG LVKFDFLGLT TLTILAAAER WIKALHADRK
DWDIGEIPLD DEKAFDVLKK ANTVAVFQLE SRGMQGMLRE AKPDRFEDII ALVALYRPGP
MDLIPDFIER KHGRQKVEYP DPRIEPVLRE TYGIMVYQEQ VMQMAQMIGG YSLGGADMLR
RAMGKKKPEE MAQHRKIFSD GAKAGGISEA KANEIYDLME RFAGYGFNKS HAAAYALLAY
QTAWLKAYYP AEFMAANLSL AMDDTDKVKI LYDDCLVNQI RVFSPDINTG VYEFTPLRAP
DATPDSPISH IRYGLGAVRG TGEAAIESIV KAREADGPFK DLFDFCARVD RRQVNRRAIE
ALMRAGAFDS LYRDSVPAGG NLYDIRSTLL ASLARAIEAA EQAEASIHQV SLFEVAGEEH
RHLPELVREP IWSEKKRLQE EKASLGLCLT GHMFDAYRDE TAHFIRQPLS KLVEGKDQLV
AGIITSARML TGQRGRMMIA TIDDGTAAVE VTLYSEVYEP NRSWLKEDEL LIAKVNVSPD
KFSGGMRIVS EAVMDITGAR MRFARNIHVC LDPAIDIRML RSQIGPYLMA NRARDPRQGA
PFATPGSNEG VKGLMLTAAV TTSGGACLMQ FPEEMRIYPD DACLHSLHQL LASKQSNAVE
VQYH
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