Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0595 |
Symbol | |
ID | 5052736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 580610 |
End bp | 581956 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470748 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001155377 |
Protein GI | 145588780 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCTA AAAAAGTGAA TCTCTCGAAA AGGTTAACAC TCAAGACGTC CGCTCAGTTC TTGAGTTTTG CTTTATTACT CACTGAGTTT GATATTGCTT GGGGTGCCAA GATCTTAGGT GTGCGCGTAT GGCCATCCGA AGATTACACG CGCGTTACCC TAGAGACAGA TAAAGCCCTA CCCATTACTC AGCAGATCCT GACTAACCCA GATCGCTTAG TGGTTGACGT GCAAGGGTTG GAGCTCAATC CAACTCTCAA AGATTTAGTG GCCAAAGTAA AGCCAAACGA TCCCTATATT TCACAAGTCC GGGTTGGTCA ATTTCAACCG GGAGTTGTGC GCTTAGTGTT CGATCTTAAA GAACCTATCA AGCCGCAGCT CTTTACCCTC GACCCCATTG GTGAGTACAA CTACCGCATG GTGTTTGACC TCTACCCTAC GACACCACCT GATCCCTTAA TGGAATTAGT TAAGAGCAGC GCTAAAAAAG AAAGTGCCCT CGAAAAATCC AATGAAGAGG TCGACCTCAT TGCGCAGTTT GCTACCAATA AGGACAAAGA GCTTGCCAAG ACTCCCGCCG CCCCAGTAGC TCAAGCCATT CCTGAGACTA AAGCACCGCC AGCTGCTGCT AAATATAAGC GCTTAATTAC AATCGCTATT GACCCTGGTC ACGGCGGTGA AGATCCTGGC GCAATTGGAG CGGCGGGCTC TAGAGAAAAG AACGTTGTAC TGTCGATTGC CAAAAGACTC AAAGACAAGA TTGAAGGCGA AGCGTATATG CGCCCCTACT TGACTAGAGA TGGCGATTAC TTCGTACCAC TACATGTCAG GGTTCAGAAA GCCAGACGAG TAGAAGCGGA TTTATTTGTA TCTATTCATG CAGATGCATT TATTGAATCC AATGCCAAAG GGGCATCCGT ATTTGCACTA TCACAAATGG GTGCCAGTAG CACCATGGCA CGCTGGATGG CTAATAAAGA AAATGCCTCA GACTTAATTG GCGGAATCAA CATCAAGACT CAAGATCGCC AAGTGGCTAA TCTCTTATTG GATATGTCGA CTACCGCTCA AATTAAAGAT TCTCTTCAGG TTGGCAACTC GATTCTGAAG CAAATAGGCG GTTTTGCACC CCTACACAAG GGAAAGGTAG AGCAAGCGAG CTTTGCCGTT CTCAAGGCCC CTGATATCCC CTCGATCTTG GTAGAGACAG CTTTCATTAG CAACCCCCAG GAAGAAGCTC GATTAAATGA TGATGGCTAT CAGGACAGAA TTGCTGAGGC CATTTTGAAG GGAATTAAGG AGTATTTTTC CAAAAATCCA CCAGTAGCCA GACGGATCAA CTCCTAG
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Protein sequence | MSSKKVNLSK RLTLKTSAQF LSFALLLTEF DIAWGAKILG VRVWPSEDYT RVTLETDKAL PITQQILTNP DRLVVDVQGL ELNPTLKDLV AKVKPNDPYI SQVRVGQFQP GVVRLVFDLK EPIKPQLFTL DPIGEYNYRM VFDLYPTTPP DPLMELVKSS AKKESALEKS NEEVDLIAQF ATNKDKELAK TPAAPVAQAI PETKAPPAAA KYKRLITIAI DPGHGGEDPG AIGAAGSREK NVVLSIAKRL KDKIEGEAYM RPYLTRDGDY FVPLHVRVQK ARRVEADLFV SIHADAFIES NAKGASVFAL SQMGASSTMA RWMANKENAS DLIGGINIKT QDRQVANLLL DMSTTAQIKD SLQVGNSILK QIGGFAPLHK GKVEQASFAV LKAPDIPSIL VETAFISNPQ EEARLNDDGY QDRIAEAILK GIKEYFSKNP PVARRINS
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