Gene Pnuc_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0592 
Symbol 
ID5052019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp577031 
End bp578011 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content45% 
IMG OID640470744 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_001155374 
Protein GI145588777 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.80162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAC CAAATGTATA CATCACACGC AGTATTCCCG AACAAACTAT TGCCGAGCTA 
AGAAAGACCT GTGATGTTGA AGTTAATCCT CATGATCGCG CTTTAACTCG CGAAGAACTC 
ATGAATGCTG TTAAGGGCCG TGATGCGGTG ATCACCCTAT TAACAGATAA CGTTGATGCC 
GAAATCCTCG ATGCAGCAGG GCCGCAATGT AAGATTATCG CCAACTACGC TGTTGGTTTT 
AACAACTTCA ATCTAGATGC AGCCACAAAA CGCGGTGTCA TCATGACCAA TACCCCCGGT 
GTTTTGGATA AGGCAACCGC CACCCATGCT TGGGCTCTCC TGTTGGCTAC TGCAAAACGT 
ATTTCAGAAT CAGAGCGCTA CGTTCGCGAG GGTAAATGGA AAGGCTGGTC CCCAATGACA 
TTTATCGGCC AAGATGTGGA CGGCAAAACT CTCGGTATCG CCGGCTTGGG CAGAATTGGT 
ACGATGTTTG CTAGAAAAGC AGCGGCTTTT GATATGAAGG TTATATATAC CAACGAACAA 
CGTAACTTCG ATTTTGAGAA AGATCATGGA GCTACCTTTG TGGATAAGGA GACCCTCCTA 
AAAGAGTCAG ACTTTCTCTC AATCCACCTG CCTTTAACTC CGGAAACAAA ATACTACATT 
GGAGCAAAAG AATTATCCCA AATGAAACCT AGCGCTATTC TCATTAATGC AGCGCGTGGT 
CCGCTCGTAA ACGAGAAAGA ATTAGTCGAA GCACTTCGCA ATAAGGTAAT TTGGGGTGCT 
GGACTTGACG TCTTTGAGGA CGAACCAAAG CTGGCTGAGG GACTTGATCA ATTGGACAAT 
GTTGTTATTG TTCCGCATAT CGCCTCTGCT ACCCTTGATA CGAGACTAGC GATGGGCAAA 
ATCGTGACTG ATAACGTTTT AGCAGTACTC AATGGAAAAG CTCCAATTAC CTGCATTAAT 
CCTGAGGTCT TAAAAAAATA A
 
Protein sequence
MSKPNVYITR SIPEQTIAEL RKTCDVEVNP HDRALTREEL MNAVKGRDAV ITLLTDNVDA 
EILDAAGPQC KIIANYAVGF NNFNLDAATK RGVIMTNTPG VLDKATATHA WALLLATAKR 
ISESERYVRE GKWKGWSPMT FIGQDVDGKT LGIAGLGRIG TMFARKAAAF DMKVIYTNEQ 
RNFDFEKDHG ATFVDKETLL KESDFLSIHL PLTPETKYYI GAKELSQMKP SAILINAARG 
PLVNEKELVE ALRNKVIWGA GLDVFEDEPK LAEGLDQLDN VVIVPHIASA TLDTRLAMGK 
IVTDNVLAVL NGKAPITCIN PEVLKK