Gene Pnuc_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0588 
Symbol 
ID5052129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp574169 
End bp574906 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content45% 
IMG OID640470740 
Producthypothetical protein 
Protein accessionYP_001155370 
Protein GI145588773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGAT TTATCCGCAT ATTTTTTTTA CTGATTTTGG CCTTATTCAT TTCATCTGCA 
TCAGGCCAGA CATCCAACGA TGTCAACTCT ACGGGAGCTA GTGCAACGAA TACTTCGGTT 
GGGGGTGGGC AATCTAATTT ATTGGGTAGC AATATTGGTA CCCAGCAAAA CTCGACTAAT 
GTTACGGGTG GGTATGGCAA CGTGAATAGC AATAATCCGG GGACTACCAC GGCAAAAGTT 
TATTCAGTTC CTACTATGTA TGCTCCGGGC TTAACAGCAG CCGGTAGCGA TGTCTGTCTT 
GGCTCTGTAT CTGCATCCGG ATCGATCCTG GGCTTAGGGC TTGCAGGTGG CGGCACTTAC 
GTGGATGACA ACTGTGTCTT GTTAAAGAAT AGTCAGAGGA TGGCAGCTTT GGGTTTTGGA 
AATGCAGCTG TCGTGATGAT GCTGCAAAAC AAGGATATAG AAAAAGCCAT CAGGACATCG 
AGCCCAACAG TCTATTTACA AGTATCAAAG GACAGATTGG CAAACTTGCA AGCAGAGTTT 
GATGATGCAA AAGAGATGGG TGAATCAACT GTTGATCTTG AAGAAAAACT CATCAAAGCC 
AATAAAGAAG TGCGCATTAT GGCTAGAAGG GTGCAAACCT CACCCGGTAT GCCGGAGAAG 
GTGGTCGAAA TTGCGCCAAC AACATCAGGT GGTAAAGCTA AAACGGCCAA TGACCCTAGA 
GAAATATTGA ATCCTTAA
 
Protein sequence
MERFIRIFFL LILALFISSA SGQTSNDVNS TGASATNTSV GGGQSNLLGS NIGTQQNSTN 
VTGGYGNVNS NNPGTTTAKV YSVPTMYAPG LTAAGSDVCL GSVSASGSIL GLGLAGGGTY 
VDDNCVLLKN SQRMAALGFG NAAVVMMLQN KDIEKAIRTS SPTVYLQVSK DRLANLQAEF 
DDAKEMGEST VDLEEKLIKA NKEVRIMARR VQTSPGMPEK VVEIAPTTSG GKAKTANDPR 
EILNP