| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0584 |
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| Symbol | |
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| ID | 5053023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 571594 |
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| End bp | 572166 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640470736 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001155366 |
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| Protein GI | 145588769 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTTTAT TTCCTAGCAA GCAACACCGC ATCGAACAGG CTTTATTAAA AAGAGCTGTA
GCGGGGGATT CCAAGGCGTC AAAAGAAGTC ATTCGCCTAC TGAGTTCCCC CGCATATTCC
TTGGCCTGGA AGATGCTTGG CAATAAAGAA GATGCAGAAG ATGTCGTACA AGAGGCCTTT
ATTCGCTTAT GGAAAAGTGC CGATTCGTTT GCGGGAAAGT CAGGACTATT TACTTACTTT
TACGCGATCG TGAGCAATCT TTGTTTGGAT AGGATCAAAA GTATTAATAA GGGATTCTTC
GAGGAGTTTG ATGAGGTAGA GCATCAACCC ATCAAAGAGA TTGAGTGGAG TATCGCAGAG
GGAGTCAGCC CAGAAAGCAT TAAAAAGGCA ATGGATGTTT TAAGTAGCAA ACAAAGAATG
GCGATATTGA TGTGGGCATA TCAAGATATG ACGGCAGAAG AGGTTGGTCT GGCAATGGGT
ATGAATAAGA ATAGCGTCGA TCAATTGTTA TATAGGGCTA AGTTGAAACT CAAGATGGAA
TTAGAAAGAG GTGAATCTCA TGCGAGCGAA TGA
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| Protein sequence | MTLFPSKQHR IEQALLKRAV AGDSKASKEV IRLLSSPAYS LAWKMLGNKE DAEDVVQEAF
IRLWKSADSF AGKSGLFTYF YAIVSNLCLD RIKSINKGFF EEFDEVEHQP IKEIEWSIAE
GVSPESIKKA MDVLSSKQRM AILMWAYQDM TAEEVGLAMG MNKNSVDQLL YRAKLKLKME
LERGESHASE
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