Gene Pnuc_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0576 
Symbol 
ID5053416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp565656 
End bp566438 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID640470729 
Producthypothetical protein 
Protein accessionYP_001155359 
Protein GI145588762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCT TTATCTATCG ATTTTCCAAT CTGACAATAA TGCTGTTTTT TATTGTTTTG 
ATTACTGCAG CAATGGACGG TTTCCCCATC CTGCTTCAAT TGCTCCCATT TTTATCGCCC 
AATGATGAGA GTACAAAATC AGGCCTCTCC TTATTTGGCC CCATAGCCTC AAGCCTTGGT 
TTATTGATTG GCTTTTTGTT AAATCAGGCG CAAACCAATT TTCGCGAGGT CGAGGGAATT 
GTCTCTACAG AAGCAGCGAG AATCAATAAT TTAGATCGAC TTCTGTTAAG GTTTGGAAGC 
GAAAAGGCGC TAGAGGCCCG CATTCAATTA AGGGCATACA TTGAGTCAAT CATTTTCATT 
GAGTGGCCAA AACTTGCTGA AGAAAATGGC AGCAAAGAAA CCCATATGTT GTGGCGCAAT 
ATATCTCAAA ACATTTTTAA ATTAGACCCA ACAACTCCCA AACAAGTAGC GCTTTACTCG 
GACATTATCA AGAAGTCTGA AGAGGTTGCT GAAAGTAGAG AAACTCGTAT TGATAAATCA 
GATAAGTGTT TGCCGACATT ATTTTGGGTG GTAATTTTTA TATGTCTTGG TGCACTTATT 
TGTCTTAATG CTATGTTTCT TCGAACAGGC CATTACATTT TTGGGCTCTC CATTCTCTCA 
ATTGCATATG GCGGGTTAAT TTCATTACTT GTTATAACTG ATCAGCCATT TAAGGGGCAG 
AATGCGATTG CCCCATCTGC TTTAATTAAA ATTCTCGCTT CAATTAAGAC CAGAATCGAA 
TAG
 
Protein sequence
MTSFIYRFSN LTIMLFFIVL ITAAMDGFPI LLQLLPFLSP NDESTKSGLS LFGPIASSLG 
LLIGFLLNQA QTNFREVEGI VSTEAARINN LDRLLLRFGS EKALEARIQL RAYIESIIFI 
EWPKLAEENG SKETHMLWRN ISQNIFKLDP TTPKQVALYS DIIKKSEEVA ESRETRIDKS 
DKCLPTLFWV VIFICLGALI CLNAMFLRTG HYIFGLSILS IAYGGLISLL VITDQPFKGQ 
NAIAPSALIK ILASIKTRIE