Gene Pnuc_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0548 
Symbol 
ID5052634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp539411 
End bp539968 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content42% 
IMG OID640470702 
Producthypothetical protein 
Protein accessionYP_001155332 
Protein GI145588735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTCGT TTCAATGGAT ACAAGCTGCT TTAGGGATTA TTGTTGGTCT TGGTATGACC 
CGGGTGATTA TCTCGGTAGT GCAAATTTGT GTTGCCAGAA GGCAGGTCAA GTTAGATTGG 
GTACCATTTA TATGGGCCTT AAATATTTTC TTCTTATTGC TGCAGTTTTC CTGGAATTTC 
GTTGAATTAG ATTCACTCAT TAGTCGCTGG AATTTTGGTC TATTTCTATT GCTGATGAGC 
TTTGTCATCA CTCTCTTTAT TGCAGCGGCG TTGATATTGC CTTTATCCGA AGCTCAGGCT 
GGCTCCGATC TCAGTTCTTG GTTTAGAAGT GATGGTCGAT GGGCTTTACC TTTTTTGGCT 
TTCTATGCTT TCTTGGCTTA TCCCTTTAAT TGGTATTTGG CTGCACTGAC TCCTGGATCT 
AATCCAGCAT CAGCAATATT GATCGTCATG TCAATGACTG CTTTCTACAC AACTTCTCGA 
AAAGTGCTAA CAACTGTGAC CGTTCTCAAT TTACTCCTCA CGCTAGCTAT TGTTGCCGAG 
ATGGTTATGA GTTCTTAG
 
Protein sequence
MHSFQWIQAA LGIIVGLGMT RVIISVVQIC VARRQVKLDW VPFIWALNIF FLLLQFSWNF 
VELDSLISRW NFGLFLLLMS FVITLFIAAA LILPLSEAQA GSDLSSWFRS DGRWALPFLA 
FYAFLAYPFN WYLAALTPGS NPASAILIVM SMTAFYTTSR KVLTTVTVLN LLLTLAIVAE 
MVMSS