| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0519 |
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| Symbol | trmD |
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| ID | 5052262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 510699 |
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| End bp | 511445 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470673 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001155303 |
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| Protein GI | 145588706 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.163871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTG ATGTAGTCAC CTTGTTTCCT GAAATGTTTT CTGCTTTAAC GCAGTGGGGC
ATTACTGGTC GGGCCTGTCA GCAGTCTTTA GCCAGTGTCC ATTTATGGAA CCCAAGAGAT
TTCTGCCCTG ATCCCCGTAA AACAGTAGAT GACCGCGCTT ATGGTGGCGG CCCCGGCATG
GTCATGATGG CCAAGCCTCT GGAAGATACA GTAGCAGGTA TACAGGCCTC ACATCAGGCA
GCTGGCATTA AAAGCGGCCC CATTTGCCTT CTGGCCCCTC AGGGGGAGCG GTTTTCACAG
AAGATAGCGA CAGATATCCT CGATTACGGA AATTTAAGCT TTATTTGTGG GCGATATGAG
GCTGTAGATC AGCGTTTTAT TGATCGAAAC GTAGATATCC AGCTTTCTAT TGGCGATTTT
GTGCTTTCTG GGGGTGAAAT CCCCGCTATG ACCATCATGG ACGCAGTCAT TAGGCTTGTT
CCAGGAGCGC TTGGAGATGG TGAATCAGCC ACCCAGGACA GCTTTATGAA TGGCCTTTTG
GACTACCCAC ACTACACGCG CCCTGAAATA TATGAAAATT TATTGGTTCC AGACGTGCTT
TTAGGCGGAC ATCACGCTAA AATAGCAGAT TGGCGTCGGC AGAAGTCTTT AGAGCTGACG
TTAAGGTTAA GGCCGGATCT GATTGAGTCG GCCCGTGCCA ATGGGTTGCT AACCCGAGAA
GATGAACAAT TTCTTCGCTC GCTGTGA
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| Protein sequence | MRFDVVTLFP EMFSALTQWG ITGRACQQSL ASVHLWNPRD FCPDPRKTVD DRAYGGGPGM
VMMAKPLEDT VAGIQASHQA AGIKSGPICL LAPQGERFSQ KIATDILDYG NLSFICGRYE
AVDQRFIDRN VDIQLSIGDF VLSGGEIPAM TIMDAVIRLV PGALGDGESA TQDSFMNGLL
DYPHYTRPEI YENLLVPDVL LGGHHAKIAD WRRQKSLELT LRLRPDLIES ARANGLLTRE
DEQFLRSL
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