Gene Pnuc_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0517 
SymbolrpsP 
ID5052035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp509778 
End bp510023 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content47% 
IMG OID640470671 
Product30S ribosomal protein S16 
Protein accessionYP_001155301 
Protein GI145588704 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGTCA TTCGACTGGC ACGCGGCGGT TCTAAGAAGC GCCCTTTTTA CAGCATCGTT 
GCTACTGATA AGCGCAACCG TCGTGACTCG AACTTTATCG AGCGTATTGG TTATTTCAAT
CCACAAGCAG CGGCTACTGA GCAAGCAATG CGCATTGCTC AAGATCGTTT GACTTACTGG
ACTGGCGTTG GTGCACAAAT TTCACCAACT GTTGTTCGTT TAATCAAGAA CAATCCAGCT
GTTTAA
 
Protein sequence
MVVIRLARGG SKKRPFYSIV ATDKRNRRDS NFIERIGYFN PQAAATEQAM RIAQDRLTYW 
TGVGAQISPT VVRLIKNNPA V