Gene Pnuc_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0516 
Symbol 
ID5052688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp509023 
End bp509553 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID640470670 
Productprotein of unknown function DUF306, Meta and HslJ 
Protein accessionYP_001155300 
Protein GI145588703 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCCA AAACAGCACT TCGCAGACCC TTTAAAAACT ACTTAAATAC TGGATTAAGA 
GGTGTTTTCT GCCTCAGCGC TAGTCTTTTG GTTGCGTGCG CGAATGTGAT TCCACCTTGT
GGGGCCAAAG TGAGCCCTCC AAGCAGTGAG CTCAAAAACA CCAAATGGGA GCTTACCCGC
TGGAACTTAG CCCCTAACTC GAATGGCGAA GTGCGCACCC GTCAGATTCC TCAGGGCGAA
AGCAACAACC CCATTCAAAT CATATTTGAT GCCAATGGCC AACGCGTAAG TGGTTCAACT
GGATGCAATC GCTTCACCGC GCAATTGGAT GAAGATGGTC GCGGCTTTTC TTTAAAACAA
ATCGCCAGCA CAAAAATGTC TTGTAGCCCG CAACGCATGG AATTAGAAAA TGATTTTCTT
TATGAATTAA ATGATTACCG CAGTATTGTT CGTAATGGCG ACCAGCTACT CATGATTGGA
ACAGATCGTG AAGTATTAAG TTTTACGCAA CGTCCTAACT CAATCAAGTA A
 
Protein sequence
MFAKTALRRP FKNYLNTGLR GVFCLSASLL VACANVIPPC GAKVSPPSSE LKNTKWELTR 
WNLAPNSNGE VRTRQIPQGE SNNPIQIIFD ANGQRVSGST GCNRFTAQLD EDGRGFSLKQ
IASTKMSCSP QRMELENDFL YELNDYRSIV RNGDQLLMIG TDREVLSFTQ RPNSIK