Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0516 |
Symbol | |
ID | 5052688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 509023 |
End bp | 509553 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470670 |
Product | protein of unknown function DUF306, Meta and HslJ |
Protein accession | YP_001155300 |
Protein GI | 145588703 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3187] Heat shock protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGCCA AAACAGCACT TCGCAGACCC TTTAAAAACT ACTTAAATAC TGGATTAAGA GGTGTTTTCT GCCTCAGCGC TAGTCTTTTG GTTGCGTGCG CGAATGTGAT TCCACCTTGT GGGGCCAAAG TGAGCCCTCC AAGCAGTGAG CTCAAAAACA CCAAATGGGA GCTTACCCGC TGGAACTTAG CCCCTAACTC GAATGGCGAA GTGCGCACCC GTCAGATTCC TCAGGGCGAA AGCAACAACC CCATTCAAAT CATATTTGAT GCCAATGGCC AACGCGTAAG TGGTTCAACT GGATGCAATC GCTTCACCGC GCAATTGGAT GAAGATGGTC GCGGCTTTTC TTTAAAACAA ATCGCCAGCA CAAAAATGTC TTGTAGCCCG CAACGCATGG AATTAGAAAA TGATTTTCTT TATGAATTAA ATGATTACCG CAGTATTGTT CGTAATGGCG ACCAGCTACT CATGATTGGA ACAGATCGTG AAGTATTAAG TTTTACGCAA CGTCCTAACT CAATCAAGTA A
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Protein sequence | MFAKTALRRP FKNYLNTGLR GVFCLSASLL VACANVIPPC GAKVSPPSSE LKNTKWELTR WNLAPNSNGE VRTRQIPQGE SNNPIQIIFD ANGQRVSGST GCNRFTAQLD EDGRGFSLKQ IASTKMSCSP QRMELENDFL YELNDYRSIV RNGDQLLMIG TDREVLSFTQ RPNSIK
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