| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0509 |
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| Symbol | |
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| ID | 5052086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 500933 |
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| End bp | 502201 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470663 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001155293 |
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| Protein GI | 145588696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTTTC GCACCTATTC TCTACTGATT GCCTTAGCTT TGGGCGCCTG CACTAGCGCC
CCTACGCAGC AATCTGCCCC CCAGCAACCC ATCGTAAACC AAGCAGACGA TGCTCTTACT
GAGGCGCGCT ATAGCCAAAA TCTCAACGTT TTATTGACTC AAGTCTCAGA AACTCAAGAA
ATCCCGCTTT CAACCCTACA AACGGGCTTT CTTGATGCTA AAACGATTCC GTCAATACGC
AAATTGGTAT TACCCCCATC GGGCACCTTT AAGAAAAATT GGCTGGTTTA TCGCAAGCGC
TTTATCGAAC CCATCCGCCT CAAGGCTGGC AAGGCTTTTT GGGAAGAAAA CCAAGCCTAT
TTAACTCAAG TAGAGCAAGA ATCTGGAGTT CCAGCGGAAG TGATTGTGGC CATTATTGGC
ATTGAAACGA TTTACGGTCG CCAAACTGGC AACTTCCGGG TCAAAGATGT TCTCTCCACT
TTAGCCTTTA GTTATCCAGA CACCCCCAAT AAGGTTGCGC GTGAGCAATT ATTCAAAGAT
CAGCTCAAGG AACTTATCCT CCTATGCTGG AAAGAAGCGG GTGGAAGCCT TCCGGGCAAA
AACAGTAACC AAGGTGTCAA TAGCGCTCGT TTTAGCGCTT GCCTGAATCA AAACAGCTCC
TACGCTGGAG CTATAGGATT GCCTCAATTT ATGCCAAGTA GTATTCGGAG TTTTGCAGTA
GACGGGGATG GTGACGGCCG AATCGATCTG AAGCAAAGTC CTAAAGATGC TATCGCTAGC
GTTGCAAATT TTATGAAAAT GCATGGCTGG CAGGCGGGAA TGCCAATTTA CTTCCCAGTT
CAGGAAAATG CCATACCTGC AGCAAGGCAA TTGGCGGATG GTGAACCTCA ACTGAAATAC
ACCGTTGCCG AATTGATTGA AAAAGGCATT CTGAGTAAAC AGCAAGGCGA TCTTCAACGT
GGTGGCGTTG AGCCGCAAAG TAAAGCCATG ATTGTGGATC TACCCTATCC AGATAAAGAT
GGCGCAGATC AAGTGCAATA CTTTGTAGGT CTGAATAACT TTCTCACGAT TGTTCAATAC
AACCGCAGCT ACTTTTATGC TCAGAGTGTG GCTGAATTCG CAGAAGCTTT GGGATACAAG
AACCGCAGTG TAGTTCCAAT TGAAGCTTCA CCCAAGGCAA CTAACAGCAA AGCAAGTCAC
GAAACAGTGC CAGCAAAAAA GTCTAGCGGA AAGAAAAAAT CAAAGTCTGC TAGCAAAACT
ACAGGCTAA
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| Protein sequence | MLFRTYSLLI ALALGACTSA PTQQSAPQQP IVNQADDALT EARYSQNLNV LLTQVSETQE
IPLSTLQTGF LDAKTIPSIR KLVLPPSGTF KKNWLVYRKR FIEPIRLKAG KAFWEENQAY
LTQVEQESGV PAEVIVAIIG IETIYGRQTG NFRVKDVLST LAFSYPDTPN KVAREQLFKD
QLKELILLCW KEAGGSLPGK NSNQGVNSAR FSACLNQNSS YAGAIGLPQF MPSSIRSFAV
DGDGDGRIDL KQSPKDAIAS VANFMKMHGW QAGMPIYFPV QENAIPAARQ LADGEPQLKY
TVAELIEKGI LSKQQGDLQR GGVEPQSKAM IVDLPYPDKD GADQVQYFVG LNNFLTIVQY
NRSYFYAQSV AEFAEALGYK NRSVVPIEAS PKATNSKASH ETVPAKKSSG KKKSKSASKT
TG
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