| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0502 |
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| Symbol | |
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| ID | 5053393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 494095 |
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| End bp | 495306 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470656 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001155286 |
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| Protein GI | 145588689 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.914976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAGA TAGCGACATC CTGGTTACTA CTTCTGCCAA TTATGTTTGG TATCGGCTGG
TTAGCGTCTC GTTGGGACTT GCGTCTTGAG AATCGCATGG ACGAGCGTGA GCGTATGCGC
CAGCAGCGTT CCACCTTTAA AGGTCTCAGT CTTTTATTAA ATGAGCAGCC CGATCAGGCG
ATTGAGACGC TCGTAAAGAT TGCGCAGCTT GATCCTGAAA CGATTGAGTT GCATTTTTCT
TTGGGTAATT TATTCCGTCG TCGTGGTGAG ACTGAACGCG CTATTCGAGT ACACCAGCAT
TTGGCCAATC GTGATGACTT AAAGCTGCGT GATCGTGATC ATGCTGCTTA TGAGTTGGGG
CGCGACTTTT TGCGTGCAGG TTTATTGGAT CGCGCTGAAG CCTCATTGAA CCGTGTGGGT
GATGGTAAGT ATGCTGTTCC GGCTAAGGAA AGCTTATTAG AAATGTATCA AGTTGAGCGT
GATTGGAAGA AAGCCATCAT TGCTGCAACT GAGCTTGAGA GTCTGCAAGG AAAATCTCAC
CATACTGAAA TTGCTCAATT TCATTGTGAG TTAGGTCAAG ATGCATTGCG TCGCAAGGAT
TTGGTTGAAG TTGAGCAGTC TATTCAACGG GCTTTGCAGG CGGTTCCTAA TCATGCGCGC
GCTCTGATTT TGCAGGGCGA TTACTTTATG GCCACAGAGC GTCCAGCGCA GGCTATCGAG
GCTTGGAGCG TGATCGCTTC TTTGCATCCT GCTTATATGC ACCTGCTTGC TGATCGTTGG
ATGTTGGCTC ATACCGCTTT AAGTAAAGAG AATGAAGGTT TAGATCGCCT GGTTGAGCTT
CTGAAAACCC AAGCCTCTGG TGAGTTGCTC GATATTGTGC ATAAACAGTT AACAGTTATT
CGAGGTCCAC AGGCTGCAAA TGCGATGCTT TCAGAAGTGA TGCAGCATTC ACCATCACTG
AGCGCATTAT CTAAGATGGC AGAAACCCGT TTGGCATTGG AGCAAGGCAG TGCGAGCCCT
GAAAGAATTT TGGAGCTCCA ATCTATTTTG AATTTATTGC GTCAACGAAC TACGAGTTTG
GCTCGCTATA CCTGCGGTAA CTGCGGTTTC CGGGCGCGCA GGTTTTATTG GCAATGTCCA
GGCTGTAATC ATTGGGAGGC ATACTCCCCC AGAAGAAGTG AAGGGGTTGC TCCTAGCGGC
CCTTCAATGT AA
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| Protein sequence | MIQIATSWLL LLPIMFGIGW LASRWDLRLE NRMDERERMR QQRSTFKGLS LLLNEQPDQA
IETLVKIAQL DPETIELHFS LGNLFRRRGE TERAIRVHQH LANRDDLKLR DRDHAAYELG
RDFLRAGLLD RAEASLNRVG DGKYAVPAKE SLLEMYQVER DWKKAIIAAT ELESLQGKSH
HTEIAQFHCE LGQDALRRKD LVEVEQSIQR ALQAVPNHAR ALILQGDYFM ATERPAQAIE
AWSVIASLHP AYMHLLADRW MLAHTALSKE NEGLDRLVEL LKTQASGELL DIVHKQLTVI
RGPQAANAML SEVMQHSPSL SALSKMAETR LALEQGSASP ERILELQSIL NLLRQRTTSL
ARYTCGNCGF RARRFYWQCP GCNHWEAYSP RRSEGVAPSG PSM
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