| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0498 |
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| Symbol | |
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| ID | 5052264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 489823 |
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| End bp | 491151 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470652 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001155282 |
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| Protein GI | 145588685 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.361377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGCA TTCCAGAAAT TACGATTGGT CCATTTACGC GAGCTCAAGG CTCGATTGTG
TTGCCAGGCT CGAAAAGTAT TTCTAATCGT GCACTGCTGC TTGCAGCCCT TGCTAGTGGC
ACAACAACTT TAAAGAATTT GCTAGATGCC GATGACACGC AAGTCATGCG CAACGCTCTG
CGTCAGTTGG GTTTATCAGT GATAGATCAA GCAAACCATG TTTGCGTAGT TAAAGGATGC
GGTGGCCAAT TTCCAGTACG TGAGGCAGAC CTCTTTATGG GAAATGCTGG CACTGCCATT
CGTCCATTAA CTGCGGCCTT AGCAATGCAA GGTGGCAATT ACCGCTTATC AGGCGTTGCT
CGCATGCATG AAAGGCCTAT ACGCGACTTA GTGGATGGTT TGCGTCAAGT AGGTGCCAAG
ATTGACTATG AATTACAAGA GGGTTATCCC CCAATCAAAA TATTGGCTGC AGATATTCAG
ATTAAAGATG TCGTTAAGGT GCGCGGCGAT GTATCAAGTC AATTTTTAAC TGCGCTACTG
ATGGCCCTCC CTTTAGTGGC TCAAGAAGCT GTGCGTATTG AAGTCATTGG TGAGCTCATT
TCTCGTCCTT ACATTGACAT CACTTTAAAA CTCATGGCGC GCTTTGGTGT GAACGTTGCT
TGCCCTGATG CTCAATCGTT TGTCATTCCT GCAAAAACCT CTGATGCTGT GTACAAAAGT
CCTGGCAACT TATCCGTCGA AGGAGATGCA TCTTCTGCCT CTTACTTCTT GGCGCTAGGC
GCACTAGGGG CTGGGCCTGT AAGAGTCTTG GGTGTGGGTA AAGATAGCAT CCAGGGTGAT
GTCGCCTTCG CTGATGCGTT AGCCCTCATG GGAGCCAAGA TCACTGCTGG TGAAGACTGG
ATTGAAGTAT CTGGTGTAAA GAATGCCGGC GGCAAACTCA ATGGTATTAC GCTCGATTGC
ACTGAAATTC CAGATGCTGC CATGACACTC GCTGTCGCTG CTTTATTTGC AGAGGGGCAA
ACCCGCTTAA ATAATATTGC TAGCTGGCGC GTGAAGGAAA CTGATCGTAT TGCAGCCATG
GCAAAAGAGT TGAAAAAAAT TGGCGCAATT GTTGAAGAGG GTGCTGATTA CATTGTTGTT
CAAGCGCCAG CCGCGTTAGG TGATTGGAAA TCACCATCAG AAGGTATCGA TACCTATGAT
GACCATCGTA TGGCAATGTG TTTCTCGCTT GCCACATTGG GCCCAAACAC TTTGAAGATC
AATGATCCCA ATTGCGTAGC TAAAACATTC CCAACTTACT TTGCAGAATT TGCAAAGATA
GTTAGTTAA
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| Protein sequence | MSGIPEITIG PFTRAQGSIV LPGSKSISNR ALLLAALASG TTTLKNLLDA DDTQVMRNAL
RQLGLSVIDQ ANHVCVVKGC GGQFPVREAD LFMGNAGTAI RPLTAALAMQ GGNYRLSGVA
RMHERPIRDL VDGLRQVGAK IDYELQEGYP PIKILAADIQ IKDVVKVRGD VSSQFLTALL
MALPLVAQEA VRIEVIGELI SRPYIDITLK LMARFGVNVA CPDAQSFVIP AKTSDAVYKS
PGNLSVEGDA SSASYFLALG ALGAGPVRVL GVGKDSIQGD VAFADALALM GAKITAGEDW
IEVSGVKNAG GKLNGITLDC TEIPDAAMTL AVAALFAEGQ TRLNNIASWR VKETDRIAAM
AKELKKIGAI VEEGADYIVV QAPAALGDWK SPSEGIDTYD DHRMAMCFSL ATLGPNTLKI
NDPNCVAKTF PTYFAEFAKI VS
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