Gene Pnuc_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0495 
Symbol 
ID5053588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp486669 
End bp487748 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content48% 
IMG OID640470649 
Productchorismate mutase 
Protein accessionYP_001155279 
Protein GI145588682 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0778684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTG AAGAACAGCG CTTAGCTCCC TTGCGTGAAA AAATTGACGC ATTGGATGCG 
CAAATTTTAG ATTTACTGAC TCAGCGAGCA AAAGCTGCTC AAGAAGTGGG TCATGTCAAA 
GGCGGATTTT CTTCACCAGT ATTTCGTCCT GAGCGCGAAC GTCAGGTTGT TGCACGTCTT 
CAAGAAATAA ATAATGGTCC CTTGCTTCCT GACGGTATTG CTGCTATCTG GCGTGAAGTG 
ATGTCTGCTT GCCGGGCATT GGAGGCTCGT CAGACCATTG CTTATTTGGG ACCAGTAGGA 
ACATTTTCTG AGCAAGCGGC ACAAACCTAT TTTGGCCATT CAATAGCAGG TCTTCCGTGC 
GCTAGTTTGG ATGAAGTATT TAAGGCGGTC GAGAAGGGTG CTGCCCAATT TGGCGTTGTA 
CCAGTAGAGA ACTCCAGTGA AGGTGCTATT TCTCGTACGT TAGATTTGTT ATTAGATTCT 
TCTATGCAGA TTAGCGGTGA AGTAGTGCTC CCAATACGTC ACCATTTACT GACTAAGAGC 
GGTAATTTGG ATGGAGTAAC AACAGTTTGT GCTCACGCCC AAGCGTTGGC TCAGTGCCAG 
CAGTGGTTGA GTATTCATGC TCCGCAATTA AAGCGTCAAG CAGTGAGCAG TAATGCTGAA 
GCGGCCCGTC TAGCTGCTGC CGATCCTACA TTGGCTGCTA TTGCTGGCGA TCCAGCGCAA 
GAGGCTTATG GCTTGCAAGC GGTTGCCGCC CAGATTCAAG ATGATCCACA CAATCGAACA 
CGCTTTGTAG TGGTAGGTAA GTACGCATGT CAGTCAACCG GGAAAGACCA GACATCGTTA 
GTCTTGTCTG TAGATAATCA ACCTGGTGCT GTTCATCGTT TATTGGCACC GTTAGCCAAG 
CATGGCGTTT CTATGAATCG CTTTGAGTCT CGTCCTGCGC GCAAAGGCAC CTGGGAATAT 
CACTTCTATA TTGATATTGC TGGTCATGCG GATGACGATA AGGTGGTGAA AGCGTTAGAA 
GAGCTTAAAG GGGTTGCCGC TTTCTATAAG AACTTGGGTT CTTATCCGCA CTCAGCTTAA
 
Protein sequence
MSTEEQRLAP LREKIDALDA QILDLLTQRA KAAQEVGHVK GGFSSPVFRP ERERQVVARL 
QEINNGPLLP DGIAAIWREV MSACRALEAR QTIAYLGPVG TFSEQAAQTY FGHSIAGLPC 
ASLDEVFKAV EKGAAQFGVV PVENSSEGAI SRTLDLLLDS SMQISGEVVL PIRHHLLTKS 
GNLDGVTTVC AHAQALAQCQ QWLSIHAPQL KRQAVSSNAE AARLAAADPT LAAIAGDPAQ 
EAYGLQAVAA QIQDDPHNRT RFVVVGKYAC QSTGKDQTSL VLSVDNQPGA VHRLLAPLAK 
HGVSMNRFES RPARKGTWEY HFYIDIAGHA DDDKVVKALE ELKGVAAFYK NLGSYPHSA