Gene Pnuc_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0482 
Symbol 
ID5052036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp471317 
End bp472690 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content47% 
IMG OID640470635 
ProductMmgE/PrpD family protein 
Protein accessionYP_001155266 
Protein GI145588669 
COG category[R] General function prediction only 
COG ID[COG2079] Uncharacterized protein involved in propionate catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCACG CTATTGCCGC CGCAGCTGAT CTCAATGCAC CTCCAGTAAC TAAAATTTTG 
GCAGAGTTTG TTACTTCACA CCCCAGCCAA GGTTGGACGC CAGAAGTAGA TCACGAAGCA
CATCGTACGT TTTTAAACTG GCTTGGTTGC GCCATTGGAG CCGCTAATCA TGAAAGCGTA
GAGTCTTCTT TAGCTGCAAT ACGGGAATTT CAGCCCGCAC CGCAAGCCAG TATTTTAGGG
CGTAAAGATA AAGTAGATAT GGGTGGCGCC GCGCTGATTA ACGGTATCAG CTCACATACT
TTTGACTTTG ATGACACACA CCTCAAAACA GTCATTCATC CAGCAGGCCC AGTTGCATCT
GCAATCCTAG CCCTAGGTGA GCACATAAAT TCAAATGGTC GCCAAATTAT CGATTCACTC
GTTCTCGGCA TCGATGTAGC CTGTCGCGTC GGTAATGCAA TGTACCCTGA TCACTATCAT
CGCGGCTGGC ATATCACTGG TTCAACCGGA ATGCTCGGCT CTGCAGCAGC ATGCTCACGT
TTGATGGGTC TTGATCTGCA AAAAACAACT ATGGCACTGG GTATTGCTGC CTCTCAACCC
GTTGGTATGC GTGAGCAATT TGGCACCATG ACTAAGCCCT TTCACCCTGG TGGTGCAGCT
CGCGCCGGAC AACTCTCCGC GCTTTTAGCG AAGCATGGTT TTACTTCAAG CCCTAAAGCG
CTTGAAGCTG GTCGTGGTTA TATGCAAACC GTATCCACCA AGTGCGACTG GAGTGAGATT
GATCGCGCCC TTGGAAAATC ATTTGAAATT TCTTTGAATA CTTATAAACC GTTTGCTTGC
GGCATTGTGA TTCATCCGGC GATTGATGCT TGCGCACAAT TACGTGCCCA GGGAGTTAAA
GCAGAGGACG TAGAGAGTAT TGAATTGCGC GTTCATCCTT TGGTATTAGA GCTTACCGGA
AAGAAAACAC CTAAAGATGG TCTCGAAGGA AAATTTAGTG TGTATCACGG CTGTGCTGTT
GGCTTGATTT TTGGTCAAGC TGGCGAAGGC GAATACGCTG ATGACATTGT GAATCGCCCT
GATGTTGTCG CCTTACGCGC TAAGGTGAAC GCCACTACGG ATACCTCTAT TAGCGAAGCA
TCAGTTGACG TTAAAGCCTT CCTAAAAGAT GGAAAAGAAG TTCATATCTT CGTGAAGAAT
GCGATTGGCT CTGTTGAGAA TCCAATGAGC GATACTCATT TAGAGCAGAA GTTCACGAGC
TTGGCAGAGC CAGTGATAGG TAAAGAAAAA ACGCGTCAAT TGATTTCTGC ATTATGGAAA
TTAGGACAAG CATCAGATCT AAAGCAGATT CTGAGCCTTT GCACCCCTGA ATAA
 
Protein sequence
MSHAIAAAAD LNAPPVTKIL AEFVTSHPSQ GWTPEVDHEA HRTFLNWLGC AIGAANHESV 
ESSLAAIREF QPAPQASILG RKDKVDMGGA ALINGISSHT FDFDDTHLKT VIHPAGPVAS
AILALGEHIN SNGRQIIDSL VLGIDVACRV GNAMYPDHYH RGWHITGSTG MLGSAAACSR
LMGLDLQKTT MALGIAASQP VGMREQFGTM TKPFHPGGAA RAGQLSALLA KHGFTSSPKA
LEAGRGYMQT VSTKCDWSEI DRALGKSFEI SLNTYKPFAC GIVIHPAIDA CAQLRAQGVK
AEDVESIELR VHPLVLELTG KKTPKDGLEG KFSVYHGCAV GLIFGQAGEG EYADDIVNRP
DVVALRAKVN ATTDTSISEA SVDVKAFLKD GKEVHIFVKN AIGSVENPMS DTHLEQKFTS
LAEPVIGKEK TRQLISALWK LGQASDLKQI LSLCTPE