Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0482 |
Symbol | |
ID | 5052036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 471317 |
End bp | 472690 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470635 |
Product | MmgE/PrpD family protein |
Protein accession | YP_001155266 |
Protein GI | 145588669 |
COG category | [R] General function prediction only |
COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCACG CTATTGCCGC CGCAGCTGAT CTCAATGCAC CTCCAGTAAC TAAAATTTTG GCAGAGTTTG TTACTTCACA CCCCAGCCAA GGTTGGACGC CAGAAGTAGA TCACGAAGCA CATCGTACGT TTTTAAACTG GCTTGGTTGC GCCATTGGAG CCGCTAATCA TGAAAGCGTA GAGTCTTCTT TAGCTGCAAT ACGGGAATTT CAGCCCGCAC CGCAAGCCAG TATTTTAGGG CGTAAAGATA AAGTAGATAT GGGTGGCGCC GCGCTGATTA ACGGTATCAG CTCACATACT TTTGACTTTG ATGACACACA CCTCAAAACA GTCATTCATC CAGCAGGCCC AGTTGCATCT GCAATCCTAG CCCTAGGTGA GCACATAAAT TCAAATGGTC GCCAAATTAT CGATTCACTC GTTCTCGGCA TCGATGTAGC CTGTCGCGTC GGTAATGCAA TGTACCCTGA TCACTATCAT CGCGGCTGGC ATATCACTGG TTCAACCGGA ATGCTCGGCT CTGCAGCAGC ATGCTCACGT TTGATGGGTC TTGATCTGCA AAAAACAACT ATGGCACTGG GTATTGCTGC CTCTCAACCC GTTGGTATGC GTGAGCAATT TGGCACCATG ACTAAGCCCT TTCACCCTGG TGGTGCAGCT CGCGCCGGAC AACTCTCCGC GCTTTTAGCG AAGCATGGTT TTACTTCAAG CCCTAAAGCG CTTGAAGCTG GTCGTGGTTA TATGCAAACC GTATCCACCA AGTGCGACTG GAGTGAGATT GATCGCGCCC TTGGAAAATC ATTTGAAATT TCTTTGAATA CTTATAAACC GTTTGCTTGC GGCATTGTGA TTCATCCGGC GATTGATGCT TGCGCACAAT TACGTGCCCA GGGAGTTAAA GCAGAGGACG TAGAGAGTAT TGAATTGCGC GTTCATCCTT TGGTATTAGA GCTTACCGGA AAGAAAACAC CTAAAGATGG TCTCGAAGGA AAATTTAGTG TGTATCACGG CTGTGCTGTT GGCTTGATTT TTGGTCAAGC TGGCGAAGGC GAATACGCTG ATGACATTGT GAATCGCCCT GATGTTGTCG CCTTACGCGC TAAGGTGAAC GCCACTACGG ATACCTCTAT TAGCGAAGCA TCAGTTGACG TTAAAGCCTT CCTAAAAGAT GGAAAAGAAG TTCATATCTT CGTGAAGAAT GCGATTGGCT CTGTTGAGAA TCCAATGAGC GATACTCATT TAGAGCAGAA GTTCACGAGC TTGGCAGAGC CAGTGATAGG TAAAGAAAAA ACGCGTCAAT TGATTTCTGC ATTATGGAAA TTAGGACAAG CATCAGATCT AAAGCAGATT CTGAGCCTTT GCACCCCTGA ATAA
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Protein sequence | MSHAIAAAAD LNAPPVTKIL AEFVTSHPSQ GWTPEVDHEA HRTFLNWLGC AIGAANHESV ESSLAAIREF QPAPQASILG RKDKVDMGGA ALINGISSHT FDFDDTHLKT VIHPAGPVAS AILALGEHIN SNGRQIIDSL VLGIDVACRV GNAMYPDHYH RGWHITGSTG MLGSAAACSR LMGLDLQKTT MALGIAASQP VGMREQFGTM TKPFHPGGAA RAGQLSALLA KHGFTSSPKA LEAGRGYMQT VSTKCDWSEI DRALGKSFEI SLNTYKPFAC GIVIHPAIDA CAQLRAQGVK AEDVESIELR VHPLVLELTG KKTPKDGLEG KFSVYHGCAV GLIFGQAGEG EYADDIVNRP DVVALRAKVN ATTDTSISEA SVDVKAFLKD GKEVHIFVKN AIGSVENPMS DTHLEQKFTS LAEPVIGKEK TRQLISALWK LGQASDLKQI LSLCTPE
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