Gene Pnuc_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0481 
Symbol 
ID5052252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp470317 
End bp471294 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content46% 
IMG OID640470634 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_001155265 
Protein GI145588668 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCTG TACCAAATAT TGTTGTTTTA GGCGACTATG AACATGCATT GCGTCGCTTC 
CCTAATTGGG AAAAATTAGA AACACAAGCA AATCTCAAGA TCTATCATGA GCCCCTAAGA 
GACGAGGCCT TATATCAAGT CATTAAAGAT GCAGATGCAA TAGCCATTGT TCGTGACCGT 
GCGCCAATGA ATGAAGCCAT GATTGCGCGC CTGCATCACT TGAAGTTTTT AATGTTTACT 
GGTGAGCGTA ATGGCACTCT AGATGCAAAG GCTTTAATGG CCCGGAACAT CACCGTTGCT 
TGCTCTCCTG GTGGTCCCTC CAAGGAAACT ACCGCTGAAC TAACTTGGGC TTTAATTCTA 
GGGGCTTCAA AACGCCTTAT TGAAGAAAAT AAATTGATTG CTAGTGGCGG TTGGCGTGAT 
GAACTTTCAC TGCTTCCAAT GCTAGCAGGA GAGCGCCTAG GCATCATGGG ACTTGGCGCT 
ATTGGTAGTC GAGTTGCACG CGTTGGTGCC GCATTCGGCA TGGAAGTAGT TGCATGGAGT 
CCACGCATGA CACCAGAGCG TGCTGCGCTT GAAAATGCTA AATCAGTTAG CTTGGAAGAA 
TTACTAAAAA CCTCTAAAGT AGTCTCGATG CACCTAGTTG CAGGGCCGGG AACCAAAGGG 
ATCATTAGTA CAGAGCAGCT TGCCTTAATG CGCCCAGACT CTATCTTGGT CAATACCTCA 
CGCGCAGCAC TCATTAATAT GGGCGATCTT CAAAAAGCGC TTGTGGCTGG AAGACCTGGT 
CAGGCAGCTG TGGATGTCTT TGACGTTGAG CCGCTTCCTA AAGATGATCC TTTGCGCAAT 
ACCGCTAACT TATTAGTCAC ACCGCACCTA GGATTTATCG CTGAACCCAT TTTTGCTGCT 
TTCTCTAAAG GCATTATTGA AGCACTTGAG GCTTGGCTAG AAAATAAACC TGCACCCCAT 
CCATTTAATC CACAGTAA
 
Protein sequence
MASVPNIVVL GDYEHALRRF PNWEKLETQA NLKIYHEPLR DEALYQVIKD ADAIAIVRDR 
APMNEAMIAR LHHLKFLMFT GERNGTLDAK ALMARNITVA CSPGGPSKET TAELTWALIL 
GASKRLIEEN KLIASGGWRD ELSLLPMLAG ERLGIMGLGA IGSRVARVGA AFGMEVVAWS 
PRMTPERAAL ENAKSVSLEE LLKTSKVVSM HLVAGPGTKG IISTEQLALM RPDSILVNTS 
RAALINMGDL QKALVAGRPG QAAVDVFDVE PLPKDDPLRN TANLLVTPHL GFIAEPIFAA 
FSKGIIEALE AWLENKPAPH PFNPQ