| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0476 |
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| Symbol | |
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| ID | 5052659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 467058 |
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| End bp | 467837 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470629 |
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| Product | extradiol ring-cleavage dioxygenase III subunit B |
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| Protein accession | YP_001155260 |
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| Protein GI | 145588663 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.622661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGCC ATCGCCAACC TGCAGTATTT GCTGGCCATG GCAGTCCAAT GTATGCCATA
GAGCCCAATC GCTATACGCA GGCTTGGGCA AATTTAGGTA AAAATTTAAA ACGCCCAGAT
GCCATTTTGG TTATCTCCGC ACATTGGGTC ACTCGCGGTA CATGGGTTAC CGCAATGGCT
AAGCCAAAAA CTATTCATGA CTTTGGTGGC TTTCCGCAGA CCTTGTTTGA TATTCAATAT
CCAGCACCAG GCTCTCCCGC TTTAGCGGAT CGTGTTCAAG AATTGCTAGA TATTCCTATA
GTGCTTGAAG AGAATGAGTG GGGGATTGAT CACGGCGCAT GGTCTGTTCT CAAATACCTT
TATCCCAATG CTGATGTTCC GGTAGTACAG TTAAGTTTGG ATGGATCGAT GTCGGCGCGT
GAGCACTATG AGCTTGCTAA ACAGTTAAGA CCGCTGCGCG ATGAAAATAT TCTGATTTTG
GCCAGTGGCA ATGTTGTTCA CAACCTGCGC ACGATTCATT GGCAAGATGA TGCGCAGCCA
TATCCTTGGG CAAAGGACTT TAATGACTTC TTTTCTTCTG AAATCCGCGC CAATCATCAC
GATCCATTGA TTGATTGGGA GCGTTATGGT GATGCAGCTC ACTTATCCAT TCCTACGGCT
GAGCATTACT GGCCTGCTTT ATATATTTTG GCTTTGCAAC AAGACGATGA GATTGCCAAA
GTATTTATAG ATGGAATTGA GATGAGCTCC ATTAGTATGC TCAGTTTTTC TGTTCAATAA
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| Protein sequence | MTSHRQPAVF AGHGSPMYAI EPNRYTQAWA NLGKNLKRPD AILVISAHWV TRGTWVTAMA
KPKTIHDFGG FPQTLFDIQY PAPGSPALAD RVQELLDIPI VLEENEWGID HGAWSVLKYL
YPNADVPVVQ LSLDGSMSAR EHYELAKQLR PLRDENILIL ASGNVVHNLR TIHWQDDAQP
YPWAKDFNDF FSSEIRANHH DPLIDWERYG DAAHLSIPTA EHYWPALYIL ALQQDDEIAK
VFIDGIEMSS ISMLSFSVQ
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