Gene Pnuc_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0475 
Symbol 
ID5052665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp466007 
End bp466726 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content47% 
IMG OID640470628 
Productpeptidase M50 
Protein accessionYP_001155259 
Protein GI145588662 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCGGG TTTCTTTTCT TCAGTCACTT TTGCGCTCCT ATGGATATCA TATTGCCATG 
ATTACTGACT ATTCTATCCA AGCTGTCGCA ATTAATGCGA TTCCCTTGAT TTTTGCCATC 
ACCATCCATG AAGCAGCCCA TGGGTATGCA GCCCGCAAAT TTGGGGATAA CACGGCGTAT 
ATGCTCGGCA GGGTAAGCCT CAACCCCGCT AAACATATAG ATCCAGTGGG AACTATTCTG 
ATACCCCTAG TACTGATACT GACAGGATCC CCGTTTTTAG TGGGCTATGC CAAGCCGGTA 
CCCGTCAACT TTGGCAGGCT TCGAAACCCC CGGATTGACT CTATTTGGGT TGCTCTGGCT 
GGGCCAGGAT CCAACTTTAT CCAAGCGATT CTTTGGGCTA TCTTCTGGGT TGTAGTACAG 
GGTATTGGTC TCCAAGAGCC CTTTTTCATC TCCATGGCCA AGGCAGGGAT TATGTGGAAT 
GTGGGGCTTT TAGTATTTAA TCTCTTCCCC CTACCACCCT TAGATGGCGG ACGTATCCTG 
GGAAGCCTTT TACCTGCACG TCAGTCTATT GCCCTAGGTA GATTAGAGCC TTGGGGCTTC 
TTTATTGTTC TTGGCTTGGT ATTTACCGGA ATTATCGGCA GCCTATGGAT GGAGCCCCTG 
AGCAACTTTT TCCTGGGAAT CATTAATTTA TTGATCACCC CCCTTAGAAT GCTTTTTTAA
 
Protein sequence
MNRVSFLQSL LRSYGYHIAM ITDYSIQAVA INAIPLIFAI TIHEAAHGYA ARKFGDNTAY 
MLGRVSLNPA KHIDPVGTIL IPLVLILTGS PFLVGYAKPV PVNFGRLRNP RIDSIWVALA 
GPGSNFIQAI LWAIFWVVVQ GIGLQEPFFI SMAKAGIMWN VGLLVFNLFP LPPLDGGRIL 
GSLLPARQSI ALGRLEPWGF FIVLGLVFTG IIGSLWMEPL SNFFLGIINL LITPLRMLF