Gene Pnuc_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0474 
Symbol 
ID5052888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp465484 
End bp465936 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content45% 
IMG OID640470627 
Productcytochrome c, class II 
Protein accessionYP_001155258 
Protein GI145588661 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.731529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAC GAAAAATCAT CTTAGCTGGA GCAGCTATCG CATTAACGAT CAGTGCTAGC 
ACCACATTTG CGCAATTTCA AAATGCTGAT AAAGCAGTTG AATATCGTGA GAGTGTGATG 
ACTGTGATTG GTACGCATTT CGGTAGGATC GGTGCAGTTG TTAAAGGCGA TGTTCCCTAC 
AATAAAGATG AGGTTGCAAA GAATGCAGCG ATCGTAGCGA TGATGTCTAC ACTCCCCTGG 
CAGGCATTTG GCCCAGGCAC TGAAGGTGGT AAGGCTAAGC CAGAGGTTTG GTCGGATAAC 
GCCAAGTTCA AAGCAGCGGC TGAAAAAATG CAGCTAGCAG CAGCTAATCT CAATACTGCA 
GCACAGTCAG GCGACTTAGA CAATATCAAA AAAGCGTTTG GCGCCACTGG GCAAGCCTGT 
AAAGGCTGCC ATGATGATTT TAAAAAGAAA TAA
 
Protein sequence
MTIRKIILAG AAIALTISAS TTFAQFQNAD KAVEYRESVM TVIGTHFGRI GAVVKGDVPY 
NKDEVAKNAA IVAMMSTLPW QAFGPGTEGG KAKPEVWSDN AKFKAAAEKM QLAAANLNTA 
AQSGDLDNIK KAFGATGQAC KGCHDDFKKK