Gene Pnuc_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0473 
Symbol 
ID5052949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp464803 
End bp465483 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content44% 
IMG OID640470626 
Productcytochrome B561 
Protein accessionYP_001155257 
Protein GI145588660 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.323429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA TGATCCGCAT ATGGGACTTA CCACTCCGTC TTTTTCACTG GCTACTCGTG 
GCTTGTATTG TGGGGAGCTT AATTTGCGTC AATATTGGCG GTAATGCTAT TGAATACCAT 
GCCTATTTTG GTTATTCCAT TTTGACGCTC TTGATCTTCA GGCTAGTCTG GGGATTTGTG 
GGATCGACTC ACGCACGATT TACATCCTTC TTTCCAAGTC CTGCAAAGAT CATCCATTAT 
TTGCAGGGAA GCTCACCACG CGTTTTAGGA CACAACCCAA TTGGGGCTCT TTCAGTATTT 
GCCTTACTTT TTGTTTTGTG CGTTCAAGCC TTCACTGGCT TATTCGTAGA TGACGAGATT 
GCATTTCAGG GTCCGCTTGC TAAATTTGCT TCGGGGTCTG TTGTTTCATT TTTATCTGAG 
ATACATGAAG GCAACCAAGT GGTGATTTAC ACCTTAATCA CTATCCATAT CGCTGCGATT 
TGGTATTACA ACAAATTCAA AGGTGAAAAC CTCATTAAAC CGATGATCAC TGGCGATAAA 
GAAATTGACC CAAGCGAGGA GGCAAAGTAT CTGCCTACTG ACTTGGGCCG CGCCTCCAAA 
GATGGAGGTT TACAGCGCGC CTTTGCTTTG GTATTGCTGA GCGTGATCGC TGTAGTAGTT 
GGTTACTTCA TTACTCAGTA A
 
Protein sequence
MKKMIRIWDL PLRLFHWLLV ACIVGSLICV NIGGNAIEYH AYFGYSILTL LIFRLVWGFV 
GSTHARFTSF FPSPAKIIHY LQGSSPRVLG HNPIGALSVF ALLFVLCVQA FTGLFVDDEI 
AFQGPLAKFA SGSVVSFLSE IHEGNQVVIY TLITIHIAAI WYYNKFKGEN LIKPMITGDK 
EIDPSEEAKY LPTDLGRASK DGGLQRAFAL VLLSVIAVVV GYFITQ