Gene Pnuc_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0472 
Symbol 
ID5053067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp463554 
End bp464759 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content48% 
IMG OID640470625 
Productmajor facilitator transporter 
Protein accessionYP_001155256 
Protein GI145588659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.618831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAA GCAAAGCTTT TAGAACCCTG CTGCTTTATC GTATTGGCGC TACCCTCAGC 
TATCAAATCA CGATGGTGGC TGTTGGTTGG CATCTATATG AAATTACTAA TAGCGTTGTA 
TCTCTTGGCT TAGTTGGCCT AGCCGAGCTG GTTCCCTACT TTCTCTTAGC CCTATATGCA 
GGTCACGCGG TTGATCACTA CTCCCGCAAA CTGATCGCGG CATTTGCATG TCTGATTCAT 
ATTGCAGTTG CCCTGTTTCT AACGGGAATT GCTCTTGGGT GGCTTACTCC GCCAGTGCCA 
CTGATTTACA CAGCCATCGC ATTTATCGGG GCTGGCCGGG CATTATTGAG GCCTTCCTAT 
ACCGCCATCT TTGGTCAAAT CATTCCCCGC GCGCAATTGC CTCGCTATAC CGCTTATGCC 
TCATCCGCCT TTCAGATTTG CGTAGTGGCA GGTCCTGGAC TTGGGGGCTT ATTGATTGGC 
TTTGCCGGTC TAGAGTGGAC GTATTTGATG GCAGCCTTTT GTGGCGCCCT CGGTTTGTAT 
GGCATTACCT TTATTCACGC CCCACCGGAG AAGATCAGCC AATTAGGCGG GCATTTTTTC 
AAAAGCTTTT TAGAAGGCTT TCATTACGTG AGAAAACATG AACTCATTCT AGGGATCATG 
GCTTTAGACA TGTTTGCCGT TCTCTTTGGC GGCGCCGTCT CTATTCTGCC GGCCTTTGTC 
AAAGAGATAT TGGATGCGGG TCCAGAAGTA TTGGGCATCT TGCGTGCCGC TCCCGCAGCT 
GGGGCCGTGA TTACTGGCAT CTATTTAGCA AGACGTCCTT TGCTTACTGA CTCTGGAAAA 
CATTTATTTC TCTCTGTTGC CGGATTTGGG CTCGCCATCA TTGCTTTTGG CATCTCCAAC 
CATTTGTGGA TATGCGCCTT TTTCTTATTT ATTTCTGGTT GTTGCGATTC AGTGTCAGTA 
GTGATTCGCG GCAGCATTAT GCAATTAACG ACACCTGATC ATATGCGTGG CAGAATTAGC 
GCCATCAATG GCATCTTCAT TGGATCTTCA AACGAGTTGG GTGCACTGGA GTCCGGAATT 
GCTGCAAGCC TGATGGGCTT AGTACCTTCT ATTGTCTTTG GTGGAGTAGC AACCATCGCG 
ATTGTGCTGA TCACTTATAA GCTAGCTCCG CACTTAAGCA AACTACATCT CAAAGATATC 
TCGTAG
 
Protein sequence
MNPSKAFRTL LLYRIGATLS YQITMVAVGW HLYEITNSVV SLGLVGLAEL VPYFLLALYA 
GHAVDHYSRK LIAAFACLIH IAVALFLTGI ALGWLTPPVP LIYTAIAFIG AGRALLRPSY 
TAIFGQIIPR AQLPRYTAYA SSAFQICVVA GPGLGGLLIG FAGLEWTYLM AAFCGALGLY 
GITFIHAPPE KISQLGGHFF KSFLEGFHYV RKHELILGIM ALDMFAVLFG GAVSILPAFV 
KEILDAGPEV LGILRAAPAA GAVITGIYLA RRPLLTDSGK HLFLSVAGFG LAIIAFGISN 
HLWICAFFLF ISGCCDSVSV VIRGSIMQLT TPDHMRGRIS AINGIFIGSS NELGALESGI 
AASLMGLVPS IVFGGVATIA IVLITYKLAP HLSKLHLKDI S