| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0471 |
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| Symbol | |
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| ID | 5053197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 462592 |
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| End bp | 463533 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470624 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001155255 |
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| Protein GI | 145588658 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.863916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTTA CCCCAGCTGA AACGAAAGTA GTCATAGTCG GTGGTGGCAC TATGGGGGCA
GATGTGGCAG CAGTTTGTGC TCGTGGCGGT TGTGCAGTGC AGGTAGTGGA GCCCACAACA
GAGCGCCGCG CACTGCTACC CGATTACTTT GTCAATACGA TGACTGATCT TGGATATGAA
CATCGTATTC ATCTTTTGAC GGTTGCCGGC TCCCTTGAGG AAGTCGATTG GGCAGACGTA
GATCTGGTGA TCGAGTGTGT ACCCGAACGC TTAGATATCA AGCAAGAGTT ATTTGCAAAG
CTAGAAAAGT ATGCAAAACC GGAAGCAGTC TTGGCAAGCA ATAGCACCAG CTTCCCAATC
AGTGAGATTG CTAGCGGTTT AAAAACTGCT GCACGTATGA TCGGCTTACA TTTCTTTATG
CCGGCCCATT TAGTTCCTTG TGTAGAGGTG GTTTATGGTG AAAAAACTTC ACCCATGGTT
GGTGACAGTC TGTCTAGATT GATGACAGCA TGTGGCATGG TTCCAGTGAC CGTGAAAAAA
GATTTACCGG GATTCTTAGC CAATCGTTTA CAGCATGCAC TCTCACGTGA AGCTTTTGCT
ATGGTCGATG CCGGTATATG TACCCCAGAA GATATTGATA AAGCAGTTCG TTTTGGCTTT
GGCTTTCGTT ACATTGCAGC CGGCCCAGCT ATGCAGCGAG ATCATGCAGG GCTTGAAGTT
CATGCGGCTG GTGGTGCCAA AATTTATCCC TCTCTAAATA ATTCACCAAC GATTGCAAAG
TGCTTGAGTG ATCGGGTGGA GAGTGGAAAA TTCGGCATGA AAACAGGCGA AGGCTTTTTC
CCTTGGACTG CTGAAACAAT TAAGGCTGAA CGTGAGCGCT ATCAAGATGC TTTGCGTGCT
GGCTTAAAGA TTATTCAAAA AGATTTACCT GAAATCAAAT AG
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| Protein sequence | MLFTPAETKV VIVGGGTMGA DVAAVCARGG CAVQVVEPTT ERRALLPDYF VNTMTDLGYE
HRIHLLTVAG SLEEVDWADV DLVIECVPER LDIKQELFAK LEKYAKPEAV LASNSTSFPI
SEIASGLKTA ARMIGLHFFM PAHLVPCVEV VYGEKTSPMV GDSLSRLMTA CGMVPVTVKK
DLPGFLANRL QHALSREAFA MVDAGICTPE DIDKAVRFGF GFRYIAAGPA MQRDHAGLEV
HAAGGAKIYP SLNNSPTIAK CLSDRVESGK FGMKTGEGFF PWTAETIKAE RERYQDALRA
GLKIIQKDLP EIK
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