| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0450 |
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| Symbol | |
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| ID | 5053011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 441951 |
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| End bp | 443183 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470603 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001155234 |
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| Protein GI | 145588637 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0280887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTC GTTCAACTAG TTATACCCCT CTTATGCTGA TGGCACAAAC CTGTGCCTTA
TTGGGTTTTG CCTGTTATGC AGTTGTTCTT ACTCCATTAC AAGAGGAGTG GGGCTTAAGT
AATCTCCAAT CCGGCCTTAT TGCCAGCGCT TTTTTCTTTG GTTATATGTT GGCCGTACCT
GTGGCTACTG CTTTAACCGA CCGGATCGAT GCTCGCAAAG TGTATTTAAT CGGGGGCTTG
TCTGCGGCAA TCGGTTTATT GGGTATGGGA ATTTTTTCCC ATAACTTTTG GACTGCCTTG
TTATTCATGG CAATTAATGG GGCCGGGCTT GCCGGAACCT ACATGCCTGG GCTGAAGATT
TTGTCAGACC GAATCAAATC CGGAGAGCTC ACGCGCCATA TTGCTTTTTA TACTGCCTTC
TTTGGCATTG GCACTGGTTT CTCTTATCTT TGTTCTGGGT GGATCTTAAG TTTGCTTGGG
TGGCGTTATG TATTTGGCCT CATTGCTTTA GGGCCCTTGC TAGCATTTGT GATTGTTCTT
TGTTTCATAC CGCCACTCGA TCACGAAAAA TGGAGTGGGC CTTTGCAAAT TCGATTGCGT
GATTTATTTC CAGTAGATAA ATGGAAGATA GTCTTGCAAG ATAAAAAAGC AGCTGGTTTT
ATTTTTGGAT ATACAGCCCA TACAATCGAG CTCTTTGCAT CTCGTAGTTG GATTGTGGCT
TTCTTTGCTT TTTGCGCAAT AAGTTCTGGC GAATCCTTTT TTCTAGCGAT TACTACATTG
GCTGGAATCA TTAACTTCTT TGGTGTACCT GCTTCGATAT TAGGCAATGA AATTGCATTA
CGGATTGGCC GACAAAGATG GGTTTGTATC GCGATGATTA CGAGTGCTGT GCTCGGTATT
ATCTTGGCCA GTTCGACTGG GCATACATGG TGGCTCATTA TTATTTTAGC AGTTGCGCAT
GCAGTTTTTA TCATGGCAGA CTCAGCAACA TTGACGGCCG GCTTAGTCAT GAGCGCTCAA
GAAAATATTA AGGGTGCAGC TATGGGATTG CATTCTTTAA TGGGTTTTGG TGGTGGCTTA
TTGGGCCCTG CAATTTTTGG CTTTGTCTTG GATATTGCAG GCTCACGCTC ATCACACGCG
GCGTGGATAT GGGCTTATGC TGCAATCGTG ATTTGGGGTG TGCTCTTTGT GCTGTATGAG
CGCCGTAATG GTTGGGCTGG TAAATCAGCT TGA
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| Protein sequence | MRFRSTSYTP LMLMAQTCAL LGFACYAVVL TPLQEEWGLS NLQSGLIASA FFFGYMLAVP
VATALTDRID ARKVYLIGGL SAAIGLLGMG IFSHNFWTAL LFMAINGAGL AGTYMPGLKI
LSDRIKSGEL TRHIAFYTAF FGIGTGFSYL CSGWILSLLG WRYVFGLIAL GPLLAFVIVL
CFIPPLDHEK WSGPLQIRLR DLFPVDKWKI VLQDKKAAGF IFGYTAHTIE LFASRSWIVA
FFAFCAISSG ESFFLAITTL AGIINFFGVP ASILGNEIAL RIGRQRWVCI AMITSAVLGI
ILASSTGHTW WLIIILAVAH AVFIMADSAT LTAGLVMSAQ ENIKGAAMGL HSLMGFGGGL
LGPAIFGFVL DIAGSRSSHA AWIWAYAAIV IWGVLFVLYE RRNGWAGKSA
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