Gene Pnuc_0444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0444 
Symbol 
ID5052593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp434063 
End bp435331 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content46% 
IMG OID640470597 
Productmajor facilitator transporter 
Protein accessionYP_001155228 
Protein GI145588631 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.17352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAG CTGTAATGGG TGCCAAAAGC ACTAGTAGCA ATCCCCTCAA GTCCAAGTGG 
GTTCAATTGG CCTTGGGTGT AATTTGCATG ATGTCTATAT CCAGCCCGCA ATATGTATGG
GCTCTATTTA CCAAGCCAAT CATGGGGCAG CTTGGTGTTA CTTTGACAGA GCTGCAAGTC
ACGTTTTCTA TTTTGATTGT GCTGCAAACT TTTTTCTCAC CCTTTCAGGG ATATTTGGTA
GATAAGTTTG GCCCACGTCT TCTTTTATCA ATCGGTACCA TATTGACTGG TGCAAGTTGG
GTTCTTTCTG CCAATCTCAC TACCGTCTCT AATCTTTACA TCACTTATGG TGTTTTGGGT
GGCTTGGGCA CCGGTATTGT TTACATTGGT GTTGTTGGTT TGATGGTGCG TTGGTTTCCA
AATAACCGCG GCTTTGCAGT TGGTATGGTT GCTGCTGGTT ATGGCATCGG CGCATTACTG
ACTACTTTCC CAATCGCTGA CAGTTTGGCT GTATCTGGTA TTCAGGGCAC GCTGACATTT
TTTGGATACA TCATTGGTGC CGTTGGATTA TTGGCTGCAC AAGGTATTCG CGTGCCCCAC
GCCGATCGTG TGCAAACAGC TGGTCAAATC GAAGCTGCAG CAGCAGGAGT TGCACCAAAG
ACTATGTTGA AGACACCGGT ATTTTGGGTC ATGTTTTTGA TGATGTCCAT GATGTCTACA
TCAGGACTCA TGGTGATCTC TCAAATGGGC GCCTTCGCAA AAGACTTTGG CATTACGTCA
GCGCTTGTTT TCGGTATGGC TGCCTTACCT TTAGCCTTAA CTATTGACCG TGTCACGAAT
GGTTTAACCC GCCCCTTATT TGGATGGGTA TCTGATCGTA TCGGACGTGA ATACACTATG
ACTATTGCAT TTGGCTTGGA AGCAATTGCG ATGTTTGTCT GGGTTACTAC ACGTACTGAT
CCAGTGTTAT TCGTTCTTTT GTCTGGTGTT GTGTTCTTTG GTTGGGGTGA GATTTTCTCT
TTATTTCCGT CCACTTTGAC TGATACTTTT GGTCAAAAGC ATGCCACGAC AAACTATGGT
TTTCTTTACA TGGCTCAAGG CGTTGGTTCC ATTATTGGTG GACCAATTGC AGCGTACATT
CACGGCGCGA CTGATAGCTG GATGCCTGTG TTTGCCATCA TGATCGTATT GGATGCGACA
GCTGCCATCT TGGCGTTCTT TGTTCTACGC CCAATGCGTG CTAAGTATTT GAAGTCACGT
ACTGCTTAA
 
Protein sequence
MTSAVMGAKS TSSNPLKSKW VQLALGVICM MSISSPQYVW ALFTKPIMGQ LGVTLTELQV 
TFSILIVLQT FFSPFQGYLV DKFGPRLLLS IGTILTGASW VLSANLTTVS NLYITYGVLG
GLGTGIVYIG VVGLMVRWFP NNRGFAVGMV AAGYGIGALL TTFPIADSLA VSGIQGTLTF
FGYIIGAVGL LAAQGIRVPH ADRVQTAGQI EAAAAGVAPK TMLKTPVFWV MFLMMSMMST
SGLMVISQMG AFAKDFGITS ALVFGMAALP LALTIDRVTN GLTRPLFGWV SDRIGREYTM
TIAFGLEAIA MFVWVTTRTD PVLFVLLSGV VFFGWGEIFS LFPSTLTDTF GQKHATTNYG
FLYMAQGVGS IIGGPIAAYI HGATDSWMPV FAIMIVLDAT AAILAFFVLR PMRAKYLKSR
TA