Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0444 |
Symbol | |
ID | 5052593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 434063 |
End bp | 435331 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470597 |
Product | major facilitator transporter |
Protein accession | YP_001155228 |
Protein GI | 145588631 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.17352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCAG CTGTAATGGG TGCCAAAAGC ACTAGTAGCA ATCCCCTCAA GTCCAAGTGG GTTCAATTGG CCTTGGGTGT AATTTGCATG ATGTCTATAT CCAGCCCGCA ATATGTATGG GCTCTATTTA CCAAGCCAAT CATGGGGCAG CTTGGTGTTA CTTTGACAGA GCTGCAAGTC ACGTTTTCTA TTTTGATTGT GCTGCAAACT TTTTTCTCAC CCTTTCAGGG ATATTTGGTA GATAAGTTTG GCCCACGTCT TCTTTTATCA ATCGGTACCA TATTGACTGG TGCAAGTTGG GTTCTTTCTG CCAATCTCAC TACCGTCTCT AATCTTTACA TCACTTATGG TGTTTTGGGT GGCTTGGGCA CCGGTATTGT TTACATTGGT GTTGTTGGTT TGATGGTGCG TTGGTTTCCA AATAACCGCG GCTTTGCAGT TGGTATGGTT GCTGCTGGTT ATGGCATCGG CGCATTACTG ACTACTTTCC CAATCGCTGA CAGTTTGGCT GTATCTGGTA TTCAGGGCAC GCTGACATTT TTTGGATACA TCATTGGTGC CGTTGGATTA TTGGCTGCAC AAGGTATTCG CGTGCCCCAC GCCGATCGTG TGCAAACAGC TGGTCAAATC GAAGCTGCAG CAGCAGGAGT TGCACCAAAG ACTATGTTGA AGACACCGGT ATTTTGGGTC ATGTTTTTGA TGATGTCCAT GATGTCTACA TCAGGACTCA TGGTGATCTC TCAAATGGGC GCCTTCGCAA AAGACTTTGG CATTACGTCA GCGCTTGTTT TCGGTATGGC TGCCTTACCT TTAGCCTTAA CTATTGACCG TGTCACGAAT GGTTTAACCC GCCCCTTATT TGGATGGGTA TCTGATCGTA TCGGACGTGA ATACACTATG ACTATTGCAT TTGGCTTGGA AGCAATTGCG ATGTTTGTCT GGGTTACTAC ACGTACTGAT CCAGTGTTAT TCGTTCTTTT GTCTGGTGTT GTGTTCTTTG GTTGGGGTGA GATTTTCTCT TTATTTCCGT CCACTTTGAC TGATACTTTT GGTCAAAAGC ATGCCACGAC AAACTATGGT TTTCTTTACA TGGCTCAAGG CGTTGGTTCC ATTATTGGTG GACCAATTGC AGCGTACATT CACGGCGCGA CTGATAGCTG GATGCCTGTG TTTGCCATCA TGATCGTATT GGATGCGACA GCTGCCATCT TGGCGTTCTT TGTTCTACGC CCAATGCGTG CTAAGTATTT GAAGTCACGT ACTGCTTAA
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Protein sequence | MTSAVMGAKS TSSNPLKSKW VQLALGVICM MSISSPQYVW ALFTKPIMGQ LGVTLTELQV TFSILIVLQT FFSPFQGYLV DKFGPRLLLS IGTILTGASW VLSANLTTVS NLYITYGVLG GLGTGIVYIG VVGLMVRWFP NNRGFAVGMV AAGYGIGALL TTFPIADSLA VSGIQGTLTF FGYIIGAVGL LAAQGIRVPH ADRVQTAGQI EAAAAGVAPK TMLKTPVFWV MFLMMSMMST SGLMVISQMG AFAKDFGITS ALVFGMAALP LALTIDRVTN GLTRPLFGWV SDRIGREYTM TIAFGLEAIA MFVWVTTRTD PVLFVLLSGV VFFGWGEIFS LFPSTLTDTF GQKHATTNYG FLYMAQGVGS IIGGPIAAYI HGATDSWMPV FAIMIVLDAT AAILAFFVLR PMRAKYLKSR TA
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