| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0435 |
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| Symbol | |
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| ID | 5052849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 423960 |
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| End bp | 425654 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470588 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001155219 |
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| Protein GI | 145588622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.58669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTG GGCAGATTCG CCAGTCTTCA GCCCTTCACC CCGGCAAAAT CCTGCTGCTG
GTGATTATTT ATGGGCTGCT TTGGTTTGGC ACCCTCAATT ACCGGCACCT CATCCCCTCT
GACGAGGGGC GCTACGCCGA AATGGCCCGT GAAATGCTGG TGACAGGTGA CTGGGTTACG
CCCCGCTACA ACGGCTATCA ATATTTTGAA AAGCCACCAC TACAAGTGTG GGCTACCGCA
GTCACTTTTC AGATATTTGG TATCGGGGAT TGGCAAGCAA GACTTTGGAC GGCCCTCACT
GGCTTTCTCA CCATTCTAGC AATTGGATTT ACCGGGGCGA GGATTTATAA CGCTAGAGTA
GGTTGGCTTG CAGCAGTCGT ATTGGCATCG AGCCCAATGT GGGTGATTAG CGGCCACTTC
AATTCTTTAG ACATGGGCTT GTCTGCTTTT TTAGTAGGTG CAGTCTGTAG TCTTTTATTA
GCGCAAACCT CACACAACAA ATCGAGCAGC CGAAATTGGA TGTGGGCTTG TTGGTTTTTT
ATGGCGCTCG CTACATTATC TAAAGGTCTG ATTGGTGTAG CTATTCCGGC AATGGTTTTT
ATTGTTTACT CATTTAGCGC TGGCGATTGG AAAATCTGGA CACGCCTGCG TTTCTTTAGT
GGAAGCATTC TCTTTCTCAT TGTTACAGCG CCATGGTTTG TATTGGTCTC AATTCGTAAT
CCAGTGTTTC TAGAATTCTT TTTTATTCAC GAACATTTAC AACGCTTTAC TCAAGATGCC
CATAGCCGAA CAGGGCCTCT GTATTACTTC ATCCCCCTGC TTGTTATTGG CCTACTACCA
TGGGTGCTAC AGCTCCCAGG CGCCTTAATC CAGGGCTGGA ACGAGCGCAA GCCCACCTTC
TCAATAACAT GGCTATTGGT GTGCTGGTCC GTTGTAATTT TTGCCTTTTT TAGTGTCTCG
CAATCCAAAT TACCGGGATA CATCATTCCT ATTTTTCCTG CGCTAGCCTT GTTAATAGGA
AACCGTTTAG AGCGACTGCT TGGCCATACA AATGTCATGC CGATTACTTG GCAATTGCAG
GCGCTTGGAT TTGCAGCACT AGGCTGCATT GGCTTTTTCT TCTTATCTGC AATTGGCAAA
CAAGCAAGAC CTGATGAAAT AGATGCCTAT GCACAGTATG TTTATTGGGT GATCGTTGCA
TTAATTGCTT TAATTACTTT TAGTCTTTAC GCAGCTTGGC AATGCAAGCG TAATGGGCTA
CAAAGTATTG TGAGTTTTGC TGCCGGATTT TTTCTTTGTG CAACCATCGC CGGCACTGGC
CATGAAACTT TAGGTCGCGC TGTTTCTGGA ATTGATCTTG CTAATCGGAT CAAAAATACG
ATTCCGGAAA AAGTGAATTT CTATTCAGTT CGCATGCTGG ACCACACCAT GCCATTTTAT
TTAGGTCACA CCATGATCAT GGTTGAGGAT CCAGATGAAT TGCGATTTGG CGTCGATCAA
GAGCCTGAGC TGTGGTTACC TACCCTAGAT GCCTTCATTG CGCGCTGGAA AGAAGATCAA
ACCGCTTATG CCATGATGGT TCCAGAGCAA TTTGTAGCGC TGCAAAGTCT AAACTTACCC
ATGCAAGAGG TGGATCGTGA CTCTCGAAGA GTAATTGTGA AACACCCTGA TACATCTACT
GCGACGCCTC AATAA
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| Protein sequence | MQFGQIRQSS ALHPGKILLL VIIYGLLWFG TLNYRHLIPS DEGRYAEMAR EMLVTGDWVT
PRYNGYQYFE KPPLQVWATA VTFQIFGIGD WQARLWTALT GFLTILAIGF TGARIYNARV
GWLAAVVLAS SPMWVISGHF NSLDMGLSAF LVGAVCSLLL AQTSHNKSSS RNWMWACWFF
MALATLSKGL IGVAIPAMVF IVYSFSAGDW KIWTRLRFFS GSILFLIVTA PWFVLVSIRN
PVFLEFFFIH EHLQRFTQDA HSRTGPLYYF IPLLVIGLLP WVLQLPGALI QGWNERKPTF
SITWLLVCWS VVIFAFFSVS QSKLPGYIIP IFPALALLIG NRLERLLGHT NVMPITWQLQ
ALGFAALGCI GFFFLSAIGK QARPDEIDAY AQYVYWVIVA LIALITFSLY AAWQCKRNGL
QSIVSFAAGF FLCATIAGTG HETLGRAVSG IDLANRIKNT IPEKVNFYSV RMLDHTMPFY
LGHTMIMVED PDELRFGVDQ EPELWLPTLD AFIARWKEDQ TAYAMMVPEQ FVALQSLNLP
MQEVDRDSRR VIVKHPDTST ATPQ
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