| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0426 |
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| Symbol | |
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| ID | 5052718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 415164 |
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| End bp | 415985 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640470579 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001155210 |
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| Protein GI | 145588613 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000444789 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA TTGAGTTTGA TCGGATCCAG GATCTAGTGA TAAATGCAGC AACAGATGTG
GGTCTAAAAA TATTGGCTGC ACTTGCTTTT TGGATCATAG GCCGATGGCT GATTGGAGTT
GCCCTACGTA TTACAAAGTC TGCACTTGGG CACCAAAAAA TAGACCATAC TATTTTGCGG
TATCTGAATT CGGCCCTTTC AATAACGCTC AATATTCTTC TTGTGATCGG AATACTGGGT
TTCTTTGGCA TTCAAACTAC TAGCTTTGCA GCGCTGATTG CTACTGCTGG CGTTGCCATT
GGCGCGTCAT GGGCTGGTTT GCTGTCGAAT TTTGCAGCTG GAGTTTTTAT TATTGCCTTA
CGTCCATTCA AAGTGGGCGA TGGCGTTACC ATTTGCGGTA TCACTGGAAC AGTAAGAGAG
ATTGGTCTTT TTTCCTCCAC TATCAGCACG CCTGATAACG TCATTACCTT AATTGGAAAT
AACAAAATCT TGGGTGACAC TATTCAAAAC TATAGTGATA CGCCTTATCG CCGGGTAGAT
TTAAAGTGTC AGCTGTCTGC TAGCGCAGAT AGAGAAGCGG CCATGAAGCT ACTGCGTGAA
AAGATTTCCA CAATTCCAAA CGTACTCCAA AATCCACCAG TTGAAGTCAA TATCCTGGAA
TTTAATCTAG TAGGAGCAGT ACTAGCAGTA CGCCCTTACT GCAGCAATAG TAACTACTGG
CAAGTATATT TTGAAACTAA TCGTGTAATG AGCGCTGCTC TGGAAGAGGC TAATTTTCCT
ACTCCAGTAG CGTCACAACA TATGATTATG AAACAGGATT AA
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| Protein sequence | MKDIEFDRIQ DLVINAATDV GLKILAALAF WIIGRWLIGV ALRITKSALG HQKIDHTILR
YLNSALSITL NILLVIGILG FFGIQTTSFA ALIATAGVAI GASWAGLLSN FAAGVFIIAL
RPFKVGDGVT ICGITGTVRE IGLFSSTIST PDNVITLIGN NKILGDTIQN YSDTPYRRVD
LKCQLSASAD REAAMKLLRE KISTIPNVLQ NPPVEVNILE FNLVGAVLAV RPYCSNSNYW
QVYFETNRVM SAALEEANFP TPVASQHMIM KQD
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