| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0422 |
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| Symbol | rpsR |
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| ID | 5052491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 411466 |
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| End bp | 411738 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640470575 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001155206 |
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| Protein GI | 145588609 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000044811 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGTTTG GAAAGAAACC CGATTTCAAA AAGAAACCAG CTCAGAACCC ATTGTTCAAG
CGTAAGCGTT ATTGCCGTTT CACTGTTGCT GGCGTAGAAC AGATTGACTA CAAAGATGTA
GACACATTGA AGGACTTTAT TGGCGAAAAC GCCAAGATCA CTCCTGCTCG TTTGACTGGC
ACAAAAGCTA AATATCAGCG TCAGTTAGAC ACTGCTATCA AGCGTGCTCG TTACTTGGCT
TTATTGCCAT TCTCTGATCA ACATAAGAAA TAA
|
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| Protein sequence | MAFGKKPDFK KKPAQNPLFK RKRYCRFTVA GVEQIDYKDV DTLKDFIGEN AKITPARLTG
TKAKYQRQLD TAIKRARYLA LLPFSDQHKK
|
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