| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0420 |
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| Symbol | rpsF |
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| ID | 5052419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 410724 |
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| End bp | 411098 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470573 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001155204 |
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| Protein GI | 145588607 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000077892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ATGAAATCGT CTTTATCGTC CATCCGGACC AAAGCGAGCA AGTACCTGCG
ATGATCGATC GTTACAAAGC TACATTAGCA GCTGCGGGCG GCAAAATTCA CCGTATTGAA
GATTGGGGTC GTCGTCAGAT GGCTTACATG ATCGACAAGC TTGCTAAAGC CCACTACGTT
TGCATGAACA TTGAGTGCGA CCAGAAAACT CTGGAAGAGC TCGAGCATGC GTTCAAATTT
AACGATGCTG TTTTGCGTCA CCTCATTATC AAGACTAAGA AAGCTGAAAC TGAGCCTTCC
ATCATGATGA AAGAAGTGCA ACGTGAAGAA GCGCGTAAAT CAGCTCAATC CGACGCTCCA
GCAGTAGCGG CTTAA
|
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| Protein sequence | MRHYEIVFIV HPDQSEQVPA MIDRYKATLA AAGGKIHRIE DWGRRQMAYM IDKLAKAHYV
CMNIECDQKT LEELEHAFKF NDAVLRHLII KTKKAETEPS IMMKEVQREE ARKSAQSDAP
AVAA
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