Gene Pnuc_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0416 
Symbol 
ID5053671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp407229 
End bp407804 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content43% 
IMG OID640470567 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_001155200 
Protein GI145588603 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000107705 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTCA ATCTACCAAT CGCTTTAACC TGGTTGCGTG TTGCAGCAAT TCCATTGCTG 
GTGGCTATCT TTTATCTCCC CAATACCTGG CTGACACCTT TTGATAAAAA TCTCTTTGCC 
GTGGTGATTT TTATTTCTGC TGCAATCACC GATTGGTTGG ATGGATTTCT GGCGCGTCGT 
CTCAAACAAG AATCTGCTTT TGGGCAATTT TTAGATCCGG TTGCAGATAA GTTAATCGTG 
GCAGCAGCGC TATTGGTATT ACTCAATTTA GATCGTGTGC AAGTTTGGGT AGCGCTCGTA 
ATCATCGGCC GAGAAATTAC GATTTCTGCT TTAAGGGAGT GGATGGCATT ACTCGGGGCT 
GGTAAAAGCG TGGCAGTTCA CATGGTAGGC AAGCTAAAAA CGACTGCTCA ACTCGTTGCT 
ATTCCTTTTT TATTGCTGAA TGACACCTTA TTTGGTTGGC TAGATTGCGC CAAGATTGGT 
ACTTGGTTAA TTTGGATTGC TGCCTTTTTG ACTCTATGGT CAATGTTTTA TTACCTTAAA 
AAGGCTTTGC CACAGCTCGC CGGCAAAATA GATTAA
 
Protein sequence
MPFNLPIALT WLRVAAIPLL VAIFYLPNTW LTPFDKNLFA VVIFISAAIT DWLDGFLARR 
LKQESAFGQF LDPVADKLIV AAALLVLLNL DRVQVWVALV IIGREITISA LREWMALLGA 
GKSVAVHMVG KLKTTAQLVA IPFLLLNDTL FGWLDCAKIG TWLIWIAAFL TLWSMFYYLK 
KALPQLAGKI D