Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0408 |
Symbol | recO |
ID | 5053732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 399718 |
End bp | 400452 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470559 |
Product | DNA repair protein RecO |
Protein accession | YP_001155192 |
Protein GI | 145588595 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTCGA TTCGTGTTGC TGACGAACCT GCTTTTGTAT TGCACAGCAT CCCCTATAAA GAGACTAGCT TAATCCTGGA TGTCTTTACA CGGCAGCATG GCCGCATGGC CTTAATTGCC AAGGGCGCTA AACGTCCCCA TTCTGTCTTA CGACCAGTAT TACAGCGGTT TCAACCGTTA TTAGTTTCAT GGAGTGGTAA ATCAGAATTA CGTACTCTGA CTAAATCCGA ATGGGTAGGT GGCATGCCTT CTCTAGTCGG CGATGCTTTG CTCTGTGGGT TTTATCTCAA TGAGCTATTG GTCAAGTTTT TGGCTCGAGA AGATGATTAC GAAAGGCTTT ACGATCGTTA CTCAGAAACG ATTAATGCTT TGTCTAATCT CGAGTTTGAA TCTAAAGGTT TAGAGGAAAT ATTACGACCT TTTGAACTCT CTTTATTGCA AGAGACAGGG TATGCCGCTG CATTAGATCG CTGTGTTGAA ACAAACGATT CTCCTGTTTT TGAGGCCCTC TATGTTTACC AACCTGAGCG TGGTGTGCGC CCAATACAGG TTGACGACCC CGGTCATTGG CCGGTTTTGC GGGGGAAGTC GCTCTTGGCG ATTGCTGCAG GAGATTTTTC TGATCCAGAA ACTCTGTCTG AGAGTAAGCA ACTCATGCGG TTTCTATTGG GACTGCACTT GCAGGATCAA GTCTTAACCA CGCGGCAAAT TTTGATTGAT TTAAAGAAAA TCTAG
|
Protein sequence | MASIRVADEP AFVLHSIPYK ETSLILDVFT RQHGRMALIA KGAKRPHSVL RPVLQRFQPL LVSWSGKSEL RTLTKSEWVG GMPSLVGDAL LCGFYLNELL VKFLAREDDY ERLYDRYSET INALSNLEFE SKGLEEILRP FELSLLQETG YAAALDRCVE TNDSPVFEAL YVYQPERGVR PIQVDDPGHW PVLRGKSLLA IAAGDFSDPE TLSESKQLMR FLLGLHLQDQ VLTTRQILID LKKI
|
| |