| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0405 |
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| Symbol | |
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| ID | 5052373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 397171 |
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| End bp | 397977 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470556 |
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| Product | signal peptidase I |
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| Protein accession | YP_001155189 |
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| Protein GI | 145588592 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.301469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTTTG CCCTCATCCT TTTTATCTTG GTGGTAATTT CAGGCATTGC TTGGATTGCT
GATCGCTATT ACTTTGCGCC TCAAAGACGC CTGGCTGGTA TTGACCGTAT GCCGTTATGG
CTGGAATATA CCGCTGGATT CTTCCCGGTC ATTTGCGCGG TATTTGTTTT ACGCTCTTTT
ATCGTCGAGC CATTTAAGAT CCCCTCGGGC TCCATGATTC CGACTTTGCA AATTGGCGAC
TTCATTTTGG TGAATAAATT TACCTACGGC ATTCGTTTGC CAGTCATCAA TCAGAAGGTG
ATTGACTTGG GTGCTCCAAA GCGTGGTGAT GTGATTGTTT TTCGTTACCC ACGTGATGAG
TCGATTGATT ACATCAAACG GGTAGTGGCA CTGCCTGGCG ATGTGATTGA GTATCAAGAT
AAGCGTCTGA TTATTAATGG CCAGCCCTTA GCTTACAGCG GTGGTGAGCC ATATCTCGAT
CCTGAGAATA TGCGTTATGC CAAGCTCTTT ACAGAAACAT TCCCACCAGA TTTGGGTGGC
AATCGTCACG AGATCTTGAA TGACCCAGAT CGTCCCGCAA CAGTTTTTCC GACTGAACGT
TTTCCAGGCG TTGAGTTTTG CCAGTATCAA GAATCCGGTT TAACTTGCAA AGTACCTGCG
GGTCACTATT TTGCAATGGG TGATAACCGT GATAACAGTG CAGACTCACG CTATTGGGGT
TTTGTACCAG ATAAAAATAT CGTTGGTAAA GCCTTCTTTG TTTGGCTAAA TCTGGGCAAT
CTTCGTCGAA TAGGCGGATT CGAGTAA
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| Protein sequence | MNFALILFIL VVISGIAWIA DRYYFAPQRR LAGIDRMPLW LEYTAGFFPV ICAVFVLRSF
IVEPFKIPSG SMIPTLQIGD FILVNKFTYG IRLPVINQKV IDLGAPKRGD VIVFRYPRDE
SIDYIKRVVA LPGDVIEYQD KRLIINGQPL AYSGGEPYLD PENMRYAKLF TETFPPDLGG
NRHEILNDPD RPATVFPTER FPGVEFCQYQ ESGLTCKVPA GHYFAMGDNR DNSADSRYWG
FVPDKNIVGK AFFVWLNLGN LRRIGGFE
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