| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0403 |
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| Symbol | |
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| ID | 5052180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 393768 |
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| End bp | 395219 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470554 |
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| Product | protease Do |
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| Protein accession | YP_001155187 |
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| Protein GI | 145588590 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.149111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA AGCATTTAAT TGCGCTCTTG GCTATTTTGA GTCTTGGGCA ATCCCCATTC
ATTTCCCAGT CAGTCGCCGA GACGCCTCGA GTGACAATTC CTGATTTTGC GGATTTAGTC
GAGCGCGCCA GTCCAGCGGT AGTGAATATT CGCACGACAG AAAAGGTGAA TGTTCAACAA
ACTCAGGGTG GTATTCCTGG GATGCCAGAA GATCAAGCAG AATTTTTCCG CCGTTTCTTC
GGCGTTCCTA TTCCCGGAAT TCCAAACAGC CCTAAGCAAG TACAGCCAGC TCCCGGTAAA
CCTCAAGAGG CTGATCGCGG TGTAGGTTCA GGTTTTATTA TTGATTCCAA CGGCATGATC
TTGACGAACG CGCACGTAGT TGAAGGTGCA ACAACGATTT ATGTCACCTT GACTGATAAG
CGCGAATTCA AAGCGAAGTT GTTGGGTATG GATAAGCGCA CCGACGTAGC CGTAGTCAAA
ATTGATGCGC GTGATCTCCC TAGATTACCT TTGGGTGACT CTTCTAAGGT GCGTGTGGGT
GAATGGGTGC TCGCCATTGG CTCCCCGTTC GGCCTGGAGA ATACGGTCAC TGCAGGTATC
GTTTCTGCAA AGAGTCGAGA TACTGGCGAC TATCTGCCAT TCATCCAAAC AGACGTTGCT
GTGAATCCTG GTAACTCTGG CGGTCCACTC TTAAACACAG CGGGACAAGT GATTGGCATT
AATTCGCAAA TATTTAGTCG CTCTGGCGGA TACATGGGAA TTTCTTTTGC CATTCCGATT
GATGAAGCAA TACGCGTTGC CGATCAATTG CGTACCAATG GAAAAATGAC GCGTGGCCGT
ATCGGTGTCG CTTTAGGTGA TATGACTAAA GAAGTGGCTG AGAGTTTAGG TTTGGGTAAG
CCACGTGGGG CATATGTTCG CAATGTCGAG CCAGGCGGTC CTGCAGCTGG AGGTGGCATT
GAATCAGGCG ATGTAATTTT GAGTTTTAAT GGACACGAAA TCAATAAGTC AACGGATTTA
CCAAGAGTAG TTGGAGAAAC TAAGCCTGGC ACTTCTGTAG TGGTGCAAGT TTGGCGTAAA
GGCACTACTC GCGACCTCAC GGTTACTGTG ACGGATGCGG AGTCAAACCA GGCTGCCATT
AAAAAGCAGG AGGTACCGGC TGCCAGTGGT AACGGTGGAA ATGTTCTGGG TATCCAGGTA
AATGACTTAA GTGATGCCAA GAAGAAGGAC TGGAATATCA AAGGGGGCGT TGAAGTGACT
GGCCTTGGCG ACGGTCCTTT AGCTAGGGCG GGGGTTCGTC CTGGGGATGT GATTATCCGC
ATTGCTGATA CGGATATTAC GGGGGTGAAG CAGTTTGAGG CCCTGGTTAA AGGTCTGGAT
AGTAATAAGG CCGTTCCGGT CTTTATTCGC CGTGCTGACA GCACTTTAGT GATCCCAGTA
AGGTCAAAAT AA
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| Protein sequence | MMKKHLIALL AILSLGQSPF ISQSVAETPR VTIPDFADLV ERASPAVVNI RTTEKVNVQQ
TQGGIPGMPE DQAEFFRRFF GVPIPGIPNS PKQVQPAPGK PQEADRGVGS GFIIDSNGMI
LTNAHVVEGA TTIYVTLTDK REFKAKLLGM DKRTDVAVVK IDARDLPRLP LGDSSKVRVG
EWVLAIGSPF GLENTVTAGI VSAKSRDTGD YLPFIQTDVA VNPGNSGGPL LNTAGQVIGI
NSQIFSRSGG YMGISFAIPI DEAIRVADQL RTNGKMTRGR IGVALGDMTK EVAESLGLGK
PRGAYVRNVE PGGPAAGGGI ESGDVILSFN GHEINKSTDL PRVVGETKPG TSVVVQVWRK
GTTRDLTVTV TDAESNQAAI KKQEVPAASG NGGNVLGIQV NDLSDAKKKD WNIKGGVEVT
GLGDGPLARA GVRPGDVIIR IADTDITGVK QFEALVKGLD SNKAVPVFIR RADSTLVIPV
RSK
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