| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0402 |
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| Symbol | |
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| ID | 5052272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 392473 |
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| End bp | 393720 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470553 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
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| Protein accession | YP_001155186 |
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| Protein GI | 145588589 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0090737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGCAT CAAATGGCCG ACGCCGGGTA GTTATTACCG GCCTTGGCCT CATCTCACCT
GTTGGTAATT CGGTTGACGT AGCTTGGTCT AATGTGCTCG CGGGCAAATC AGGCATTGCT
ACGATCACCA AGTTTGACCA CACGCCGCTT AGCGTTCATT TCGCTGGAGA GGTGAAAGAT
TTCAATGTCG AAGAATATGT TTCTGCTAAA GAAGCGCGCC ACATGGATAC ATTTATCCAT
TACGGCATTG CTGCTGGCAC ACAAGCAATT CGCGACAGTG GACTAGAGAT TAACGAGCAA
AACGCGGAAC GCGTTGGCGT TATGGTGGGC TCTGGTATTG GCGGTTTGCC AATGATCGAG
GAAACAGGCG CTGAGCTGTT GGCTCGCGGC CCTCGTCGCA TCTCCCCGTT CTTTGTGCCC
GGCTCAATCA TTAATATGAT TTCTGGTCAT CTAAGCATTT TGTTTGGCCT CAAAGGTCCT
AACGTCGCTG CAGTAACCGC TTGTACTACT GGTTTGCATA GCATTGGTTT AGCTGCACGT
TTGATTCAGT ATGGTGATGC TGATGTAATG GTTGCTGGTG GTGCTGAGTC CACAATCTCG
GCTTTAGGTG TTGGTGGTTT TGCATCCGCA AGAGCGCTCT CTACACGTAA TGATGATCCT
GCAACTGCGT CACGTCCTTG GGATAGGGAT CGTGATGGTT TTGTTCTGGG TGAAGGTGCT
GGTGTGGTGG TGCTTGAAGA GTATGAGCAC GCAAAAGCAC GTGGCGCAAA AATTTACTGT
GAACTACTTG GCTTTGGTAT GAGTGGTGAC GCGTATCACA TGACCGCTCC AAATATGGAT
GGTCCACGCC GTTGTATGTT GAATGCAATG CGTGATGCTG GCTTAAACGC AGATCAAATC
CAATACATTA ATGCTCACGG TACTTCTACA CCTTTGGGTG ACAAGAATGA AACTGGGGCG
ATCAAGGCTG CTCTGGGCGA TCATGCTAAG AAGGTTCTAA TTAATTCGAC CAAGTCGATG
ACTGGCCACC TCTTGGGTGG GGCAGGCGGC TTGGAGTCTG TATTTACCAT TCTGGCCCTC
CATAACCAGA AATCTCCGCC AACAATCAAT ATCTTTAATC AGGATCCTGA GTGCGATTTG
GACTACTGCG CCAATACTGC CAGGGACGTT AAGATTGATC ATGCAGTCAA AAACAACTTT
GGCTTTGGTG GTACTAACGG CACCTTGATT TTTGGTAAGC TGACCTAA
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| Protein sequence | MSASNGRRRV VITGLGLISP VGNSVDVAWS NVLAGKSGIA TITKFDHTPL SVHFAGEVKD
FNVEEYVSAK EARHMDTFIH YGIAAGTQAI RDSGLEINEQ NAERVGVMVG SGIGGLPMIE
ETGAELLARG PRRISPFFVP GSIINMISGH LSILFGLKGP NVAAVTACTT GLHSIGLAAR
LIQYGDADVM VAGGAESTIS ALGVGGFASA RALSTRNDDP ATASRPWDRD RDGFVLGEGA
GVVVLEEYEH AKARGAKIYC ELLGFGMSGD AYHMTAPNMD GPRRCMLNAM RDAGLNADQI
QYINAHGTST PLGDKNETGA IKAALGDHAK KVLINSTKSM TGHLLGGAGG LESVFTILAL
HNQKSPPTIN IFNQDPECDL DYCANTARDV KIDHAVKNNF GFGGTNGTLI FGKLT
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