| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0400 |
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| Symbol | |
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| ID | 5052282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 391368 |
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| End bp | 392111 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470551 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_001155184 |
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| Protein GI | 145588587 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0215607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTCG ACTTAAGCGG ACAAATTGCT TTAGTAACTG GCGCATCGCG CGGAATTGGT
CAAGCGATTG CGGATGAATT AGTGAGCTGT GGTGCAAAGG TAATCGGTAC AGCGACTTCA
GAGAGTGGGG CTAATGCTAT TAATGAGCGT TTGAAACCGT CTGGCGGAGC TGGCTTGGTG
CTCAATGTCA CTGCACCCAA TGCTTGCGAA GAGATCATCG ATCAGATCGT GAAAGAGTAT
GGCGGTATTA ATATTTTGGT TAATAACGCC GGCATCACAC GTGATAACTT ATCCATGCGT
ATGAAGGGTG ATGAATGGAC GGACGTCATT GATACCAACT TAAGCGCCGT CTTCCGTTTA
TCTCAAGCAG TAATGCGTCC CATGATGAAG GCTCGTGGTG GTCGCATTAT CAATATCACC
TCTATCGTAG GTCATATGGG AAATCCGGGG CAGGCGAACT ACGCAGCTGC AAAAGCAGGT
GTTTCTGGGA TGACGCGTGC CCTAGCCCGT GAAATCGGTA GCCGAAACAT CACAGTGAAC
TGTGTCGCCC CCGGCTTTAT TGATACCGAT ATGACCCGTG CCTTGAGTGA AGATCAGCAA
AATGCCCTAA AAGTGAACAT TCCTTTAGCG CGTTTGGGTA GCCCAGAGGA TGTAGCCCAG
GCAGTGGCCT TTTTGGCCTC TCCAGCGGCT GCCTACATTA CGGGTAATAC CCTACACGTC
AATGGCGGAC TATATTTAGC CTAA
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| Protein sequence | MNLDLSGQIA LVTGASRGIG QAIADELVSC GAKVIGTATS ESGANAINER LKPSGGAGLV
LNVTAPNACE EIIDQIVKEY GGINILVNNA GITRDNLSMR MKGDEWTDVI DTNLSAVFRL
SQAVMRPMMK ARGGRIINIT SIVGHMGNPG QANYAAAKAG VSGMTRALAR EIGSRNITVN
CVAPGFIDTD MTRALSEDQQ NALKVNIPLA RLGSPEDVAQ AVAFLASPAA AYITGNTLHV
NGGLYLA
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