| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0396 |
|---|
| Symbol | rpmF |
|---|
| ID | 5052538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 388091 |
|---|
| End bp | 388270 |
|---|
| Gene Length | 180 bp |
|---|
| Protein Length | 59 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640470547 |
|---|
| Product | 50S ribosomal protein L32 |
|---|
| Protein accession | YP_001155180 |
|---|
| Protein GI | 145588583 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0333] Ribosomal protein L32 |
|---|
| TIGRFAM ID | [TIGR01031] ribosomal protein L32 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTC AACAAAATAA AAAATCACCT TCCAAACGTG GCATGCACCG TGCGCACGAC
TTTTTGACCG CACCTGCTAC GGCTGTTGAA GCCACAACTG GTGAGGCTCA TTTGCGCCAC
CACATTTCAC CTAACGGCTA CTATCGTGGT CGTAAAGTGG TTAAAACAAA AAACGACTAA
|
|---|
| Protein sequence | MAVQQNKKSP SKRGMHRAHD FLTAPATAVE ATTGEAHLRH HISPNGYYRG RKVVKTKND
|
|---|
| |