| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0392 |
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| Symbol | |
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| ID | 5053576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 384990 |
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| End bp | 385937 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470543 |
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| Product | peptidase S49 |
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| Protein accession | YP_001155176 |
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| Protein GI | 145588579 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATA ATCCAAATCC CAACTGGGAA CGCCAAGCGC TAGAGCACTT GCTTTTGGAG
AGCTTAAAAG AGACACGAAA AGCCCGCCGC TGGAAAGCAG TCATGCGAGT GCTAACCTTG
TTGGTTATCG TAGGGGTTCT TCTGGTGGTG TTTGATTTTC ATCTTCCAGG ACGTGGCATG
GGGGTGGAAA AACATACTGC GATGGTGACC CTAGATGGTG AGATTTCTTC TAGCTCCATG
GCAAATGCGA TGGATATTAA TTCAGCGCTA ACAGCTGCTT TTGAAAATGA ACATAGTGCG
GGTGTGATCT TGCGCATCAA TAGCCCTGGT GGGTCACCAG TGCAAGCAGG AATGATGAAT
GATGAGATTC ATCGTTTGCG CAAACTGCAT CCAAACAAAC CGTTTTACGT AGTGGTTGAA
GACATTTGTG CTTCTGGTGG TTACTACGTT GCTGTTGCCT CAGATCAAAT TCTGGTAGAC
AAGGCCAGCT TGGTAGGCTC CATTGGTGTG ATCATGGAAG GCTTTGGATT TACTGGCTTG
ATGGATAAGT TGGGCGTAAC CCGTCGCATG ATTACTGCGG GTTCAAATAA GGGCATGTTG
GATCCTTTTA GCAAAGAAGA GCCCAAGCAA GTCGAGATGG TGAAAACGAT GATCGATGAG
ATTCATCAGC AATTTATTGC TGTGGTGAAA GAGGGTCGTG GCGCTCGCTT GAAGGAAACG
CCAGATTTAT TCTCCGGCCG TATTTGGAAT GGTGAGCAAG CCGTTAAATT AGGGTTGGTT
GATGGTTACG GTACTGTAGA TTCAGTAGCG CGAGATATCT TTAAAGCGCC TGATATTTTG
GATTACACCC AGAAAGAAAA CTTTGCAGAA CGCGTTGCAA AACGTTTTGG TGCAGAAGCA
GGTGCCGCAG CTGGCAAGGC TTTAGTCAAG GCGCCAGATT TGAAGTAA
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| Protein sequence | MENNPNPNWE RQALEHLLLE SLKETRKARR WKAVMRVLTL LVIVGVLLVV FDFHLPGRGM
GVEKHTAMVT LDGEISSSSM ANAMDINSAL TAAFENEHSA GVILRINSPG GSPVQAGMMN
DEIHRLRKLH PNKPFYVVVE DICASGGYYV AVASDQILVD KASLVGSIGV IMEGFGFTGL
MDKLGVTRRM ITAGSNKGML DPFSKEEPKQ VEMVKTMIDE IHQQFIAVVK EGRGARLKET
PDLFSGRIWN GEQAVKLGLV DGYGTVDSVA RDIFKAPDIL DYTQKENFAE RVAKRFGAEA
GAAAGKALVK APDLK
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