| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0384 |
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| Symbol | |
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| ID | 5052179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 375667 |
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| End bp | 376683 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470535 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001155168 |
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| Protein GI | 145588571 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGT CAACAAATAC CCAAACTAAT GCCCAAAAGC CCAAAATCTT GGTTGCTAGG
GCCATATTTC CTGAGGCTTT GGCCAAATTA GAGGAATCCT TTGAAGTTCG ATCCAATCAA
GCTGATCAGA TTTTGACTCC TGAGGAGTTA AAAAAAGAAC TTGCTGGGGT TGTTGGGGCT
CTGGTTACTG GCAGTGAACG CATTGATGCT CAGGCATTGG CGCAAGCAAA AGATCTGAAA
ATTGTGGCTA ATATTTCAGT CGGTTACAAC AACTTTGATG TACCAGCAAT TACCACTGCT
GGAGTGATGG CAACGAATAC CCCGGATGTA CTGACAGATA CAACGGCAGA CTTTGGATTT
GCCCTTCTGA TGGCAACCGC TAGACGCATT ACAGAGTCTG AGCATTGGAT CCGCGCAGGT
AAGTGGGATA AATGGTCGAT TGTGAATAAT CCACTAGGGA TGGATTTGCA TGGCAGCACT
CTAGGCATTA TTGGTATGGG TCGTATTGGC CAAGGTGTTG CTAAGCGTGC ACTAGGTTTT
GGAATGAAGG TGATTTATCA CAACCGTAGT CGTTTATCGG AGGCGGATGA AAAGGCGTGT
GCTGCCAGTT ATGTTTCTAA AGAAGAATTA CTGCGTACTG CCGATCACGT TGTTTTAGTT
TTGCCATATA GCGCCCAGAG TCATCACACT ATTGGGGAAA AAGAGCTCGC ATTAATGAAA
CCCACTGCAA CCCTGATAAA CATTGCCCGC GGGGGTATTG TGGATGATCT TGCTTTAGCT
AAAGCGTTGA GAGAGAAAAC CATTTTTGCA GCTGGCTTGG ATGTATTTGA AGGTGAGCCT
TCGGTGAATC CTGAGTTGCT TAAATTGAGC AATGTCGTAT TAGCCCCTCA TATTGCAAGT
GCAACTGAAA AGACGCGTAG AGCAATGGTG GATTTAGCGA TCGATAATTT ACGTGCTGCC
TTGGGTGGTA AAAAACCACC TAGCTTGATT AATGCGGAAG TATTTAAAGC AGAATAA
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| Protein sequence | MNTSTNTQTN AQKPKILVAR AIFPEALAKL EESFEVRSNQ ADQILTPEEL KKELAGVVGA
LVTGSERIDA QALAQAKDLK IVANISVGYN NFDVPAITTA GVMATNTPDV LTDTTADFGF
ALLMATARRI TESEHWIRAG KWDKWSIVNN PLGMDLHGST LGIIGMGRIG QGVAKRALGF
GMKVIYHNRS RLSEADEKAC AASYVSKEEL LRTADHVVLV LPYSAQSHHT IGEKELALMK
PTATLINIAR GGIVDDLALA KALREKTIFA AGLDVFEGEP SVNPELLKLS NVVLAPHIAS
ATEKTRRAMV DLAIDNLRAA LGGKKPPSLI NAEVFKAE
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