| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0381 |
|---|
| Symbol | thyA |
|---|
| ID | 5053047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 373325 |
|---|
| End bp | 374119 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640470532 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_001155165 |
|---|
| Protein GI | 145588568 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAAT ATCACAATTT AATGAAAGAA GTCCTAGCCA AGGGCGTACA AAAGTCCGAT
AGAACTGGGA CCGGCACGAT CTCGGTATTT GGGCACCAGA TGCGTTTTAA TTTGGCCGAC
GGCTTTCCAA TGGTCACCAC CAAGAAGCTC CACATGAAGT CCATTGTTTA TGAATTACTC
TGGTTTCTCA AAGGCAGTAC AGATAATAAT TGGCTTAAAG AGCGTGGCGT ATCCATCTGG
AATGAATGGG CAGCTCCTGA CGGCGATTTA GGCCCTATAT ATGGCTATCA ATGGCGTTCT
TGGCCTGCGC CTAATGGTCA GCACATTGAT CAGATCTCTG AAGTGGTGGA GACCATCAAA
AAGAATCCTG ACTCACGTCG CATCATTGTT TCAGCTTGGA ATGTGGCAGA TATCCCGCGT
ATGGCTTTAG CGCCTTGCCA CGCCTTCTTT CAGTTTTATG TTGCCGACGG AAAGTTATCC
TGCCAGCTAT ATCAGCGAAG TGCTGATATT TTCTTGGGCG TCCCATTTAA TATCGCTAGC
TACGCTTTAT TGACCCATAT GGTGGCGCAG CAATGTAATT TAGAAGTGGG TGACTTTATT
TGGACTGGTG GCGATTGTCA TTTATATAGC AACCATTTAG AGCAAGTTGA CCTCCAATTA
TCGAGAGATT TTTTACCCCT GCCTAAACTC AATATTCTGC GTAAACCAGA TTCACTCTTC
GATTATGAAT TTGAAGACTT TGAAATTGTT GGCTACGAAT CCCATCCCCA CATTAAAGCT
CCAGTAGCTA TTTAA
|
|---|
| Protein sequence | MRQYHNLMKE VLAKGVQKSD RTGTGTISVF GHQMRFNLAD GFPMVTTKKL HMKSIVYELL
WFLKGSTDNN WLKERGVSIW NEWAAPDGDL GPIYGYQWRS WPAPNGQHID QISEVVETIK
KNPDSRRIIV SAWNVADIPR MALAPCHAFF QFYVADGKLS CQLYQRSADI FLGVPFNIAS
YALLTHMVAQ QCNLEVGDFI WTGGDCHLYS NHLEQVDLQL SRDFLPLPKL NILRKPDSLF
DYEFEDFEIV GYESHPHIKA PVAI
|
|---|
| |