Gene Pnuc_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0378 
Symbol 
ID5052758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp371191 
End bp371814 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID640470529 
Producthypothetical protein 
Protein accessionYP_001155162 
Protein GI145588565 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGTTC AATACCTCAC CACTGTCAAC ATAGATTGGG TTAAATCCCA TTTCGATCTG 
GATTTACCAG CATCCACCGC CCACGATGTA TTTCCCACTT ATCCAGGACC GATTGTTTTA 
AAAAGCCACA ATACTGACCG CATGGCAATT GGACTTGCTC GATTTGGCCT GATCCCAGCC 
TGGGCTAAGG ATGAGGATTT TGGTAGAAAA ACTTACAATG CACGAGCTGA AACTGTCGCA 
ATCAAACCTT CATATAAAAA TGCATGGGCT AAACGACATT ACGCCCTCAC ATTGGTAGAT 
GCATTTTATG AACCCAGTTA TGAATCAGGC AAAGCAGTGC GCACTCGCAT TCATCAAGCT 
CAACATAAAC CTATGGCTAT TGCCTCGATT TGGGATACAT GGACGGAACC AGATACCGGC 
GAATTCATTG TATCTTTCTC GATGCTCACG ATAGATGCTA GCAATCATCC AGTGATGAAA 
CGCTTTCATA AACCAGAGGA TGAAAAACGT ACTGTAGTAC CTCTTCGACC GGAGTTGTTC 
AACGATTGGT TGAACGCTAC ACCAGAGGCG GCTAGCGCAT TACTCTGTTG CGAGTCGATG 
ACAGAGTTAG CGATCGCCGA GTAA
 
Protein sequence
MCVQYLTTVN IDWVKSHFDL DLPASTAHDV FPTYPGPIVL KSHNTDRMAI GLARFGLIPA 
WAKDEDFGRK TYNARAETVA IKPSYKNAWA KRHYALTLVD AFYEPSYESG KAVRTRIHQA 
QHKPMAIASI WDTWTEPDTG EFIVSFSMLT IDASNHPVMK RFHKPEDEKR TVVPLRPELF 
NDWLNATPEA ASALLCCESM TELAIAE