| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0375 |
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| Symbol | |
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| ID | 5052190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 369474 |
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| End bp | 370199 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470526 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001155159 |
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| Protein GI | 145588562 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC CCATTTCCCT CGAAAAGATT CTATTTAGCC AAGGCTTTGG CACGCGGCGC
TATTGCAGCG ATTTGGTATA CGCCGATTTG GTGAAGGTCA ATGGTGTATT GGCCGAAGAT
CCCGAAGAAA GAATTGCAAC CGAGGGTTTG GTCTTGACCG TAGAAGACCG GGATTGGGAA
TACCATGAAA AAGCTTATAT CGCATTTAAT AAGCCAGAAA ATTATGAGTG CTCGCATAAA
ACTACGCATC ACCCCAGTGT TTACAGTCTA TTACCGAGCC CATTTGTAGA GCGAGGCTTG
CAATGCGTAG GGCGATTAGA TTTTGACACC ACCGGGCTTT TATTGATTTC GGACGACGGG
CAGTTTATTC ATAAGATGAC GACGCCTAAA AAGAATATTG GTAAGGTGTA TGAGATCACT
ACGCCTGAGC CCATAACGCA ATCGCAAATC GATCATTTAT TAAATGGAGT GGTATTAGAC
GATGATCCCA AGCCCTGTTT TGCAGTGGCA TGCAATCAAC TCACTGAATA CACCTTGGCG
ATGACTATTG TTGAAGGGCG CTATCACCAG GTTAAGCGGA TGATGGCTGC AGTGGGCAAT
CATGTTGCCA AGCTCCATCG CACAGAAATT GGTGCGTACC TTATGCCAAC GGATTTAGCG
GAAGGGGAGT GGCGCTGGCT TTATCCTCAA GACCTGCAAA TGTTATCTAA GAGTGTTGCT
GCATAG
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| Protein sequence | MAKPISLEKI LFSQGFGTRR YCSDLVYADL VKVNGVLAED PEERIATEGL VLTVEDRDWE
YHEKAYIAFN KPENYECSHK TTHHPSVYSL LPSPFVERGL QCVGRLDFDT TGLLLISDDG
QFIHKMTTPK KNIGKVYEIT TPEPITQSQI DHLLNGVVLD DDPKPCFAVA CNQLTEYTLA
MTIVEGRYHQ VKRMMAAVGN HVAKLHRTEI GAYLMPTDLA EGEWRWLYPQ DLQMLSKSVA
A
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