Gene Pnuc_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0371 
Symbol 
ID5052239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp366791 
End bp367474 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content44% 
IMG OID640470522 
ProductTetR family transcriptional regulator 
Protein accessionYP_001155155 
Protein GI145588558 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAATT TCGGTATGAA TCAAGCCGCT GCCACCGCTC GAGATCTTCG CCAGCAAGCC 
CTCGCGGATG CAAAGCGGAG TCATATTTTG AACGCAGCCA CCTCAGTATT TATTGAGTTT 
GGCCTAGAAG CCGTCAGCAT GCGCGAGATT GCTAAGCGGG CTGGCTATAC CGCAGGTGCT 
ATTTATAGCT ACTTCGCCAA TAAGGAAGAG ATTTATGGGG CGCTCTTAGC AGAATCATTA 
GAGCGCTTGA ATGCATTTGT AAGTGAAGCT GAGCGAGCCA TTTCCCTAAA TGAGGATACC 
GGCTCGTCAA ATGATTTTCT CGTATTGCAA AAAAGTGTTT TAGCGTTTTA TCAGTTCTAC 
CGAGATAACC CACGTGATTT GGATTTGGGT TTTTATCTGT TTCAGGGCCT TAAGCCACGG 
GGCCTAACAA ATGAATGGGA TTCACAACTC AATGCACGAC TTCGAGATGC CATGCGCCCC 
CAAGAGATCG CTTTGAGTAA ATTGGGTTTT AGTAAAAATG AGATTGACAC AGAAGTGACA 
GCCATCTTTG CCCATATTGT TGGGGTCTTG CTTCTTAACC ATACGGGACG CATTCGAATG 
TTTGGTAAAA GTGCAGATGA ATTAATCAAA CATTATCTTG ATAACCTAGC CCTTCGTATA 
CCGAAGATGA CGAAGCAAAA ATAA
 
Protein sequence
MYNFGMNQAA ATARDLRQQA LADAKRSHIL NAATSVFIEF GLEAVSMREI AKRAGYTAGA 
IYSYFANKEE IYGALLAESL ERLNAFVSEA ERAISLNEDT GSSNDFLVLQ KSVLAFYQFY 
RDNPRDLDLG FYLFQGLKPR GLTNEWDSQL NARLRDAMRP QEIALSKLGF SKNEIDTEVT 
AIFAHIVGVL LLNHTGRIRM FGKSADELIK HYLDNLALRI PKMTKQK