Gene Pnuc_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0369 
Symbol 
ID5052280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp364566 
End bp365120 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content45% 
IMG OID640470520 
ProductLipocalin family protein 
Protein accessionYP_001155153 
Protein GI145588556 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA TCTATACAGC AGTCTTTGGC ATCCTCCTTC TTCTATTCAC ATCATATGGC 
TATAGTCAAT CTGAAGCGCC TGTAAAGACG ATACCCAGTC TAGATGTTCC TCGCTATATG
GGAACTTGGT ATGAGGTTGC AAAATTCCCA AATTGGTTTC AGAGGAAATG CGTTGCCAAT
ACCAAAGCTG AATACTCCAT ACAACCTGAT GGCAACCTGA AGGTGCTCAA CAGCTGTAAA
ACAGCCTCTG GGGAAGTAAC AGACGCTGAA GGTGTCGCTA AACAGATTGG AGCAAAAGAC
TCCCCAAAAC TGCTGGTTCG TTTCGCACCC GCATGGTTAT CGTTCTTGCC GATGGTATGG
GGTGATTATT GGGTGATTGA TCTCGACCCA CAATATCAAG TGGCTGCAGT GAGCGACCCA
AAGCGTGAAT ATCTTTGGGT CTTATCTAGG ACACCACAAC TGAATCAGAA AACTTACGAA
GAGCTACTGC AACGCTTAAA GGCGCAACAG TTTGATGTGC GTAAGCTTGA GTTAACTACC
CAAACAGGCA ATTAA
 
Protein sequence
MRKIYTAVFG ILLLLFTSYG YSQSEAPVKT IPSLDVPRYM GTWYEVAKFP NWFQRKCVAN 
TKAEYSIQPD GNLKVLNSCK TASGEVTDAE GVAKQIGAKD SPKLLVRFAP AWLSFLPMVW
GDYWVIDLDP QYQVAAVSDP KREYLWVLSR TPQLNQKTYE ELLQRLKAQQ FDVRKLELTT
QTGN