Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0369 |
Symbol | |
ID | 5052280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 364566 |
End bp | 365120 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470520 |
Product | Lipocalin family protein |
Protein accession | YP_001155153 |
Protein GI | 145588556 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA TCTATACAGC AGTCTTTGGC ATCCTCCTTC TTCTATTCAC ATCATATGGC TATAGTCAAT CTGAAGCGCC TGTAAAGACG ATACCCAGTC TAGATGTTCC TCGCTATATG GGAACTTGGT ATGAGGTTGC AAAATTCCCA AATTGGTTTC AGAGGAAATG CGTTGCCAAT ACCAAAGCTG AATACTCCAT ACAACCTGAT GGCAACCTGA AGGTGCTCAA CAGCTGTAAA ACAGCCTCTG GGGAAGTAAC AGACGCTGAA GGTGTCGCTA AACAGATTGG AGCAAAAGAC TCCCCAAAAC TGCTGGTTCG TTTCGCACCC GCATGGTTAT CGTTCTTGCC GATGGTATGG GGTGATTATT GGGTGATTGA TCTCGACCCA CAATATCAAG TGGCTGCAGT GAGCGACCCA AAGCGTGAAT ATCTTTGGGT CTTATCTAGG ACACCACAAC TGAATCAGAA AACTTACGAA GAGCTACTGC AACGCTTAAA GGCGCAACAG TTTGATGTGC GTAAGCTTGA GTTAACTACC CAAACAGGCA ATTAA
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Protein sequence | MRKIYTAVFG ILLLLFTSYG YSQSEAPVKT IPSLDVPRYM GTWYEVAKFP NWFQRKCVAN TKAEYSIQPD GNLKVLNSCK TASGEVTDAE GVAKQIGAKD SPKLLVRFAP AWLSFLPMVW GDYWVIDLDP QYQVAAVSDP KREYLWVLSR TPQLNQKTYE ELLQRLKAQQ FDVRKLELTT QTGN
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